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    Camkv CaM kinase-like vesicle-associated [ Rattus norvegicus (Norway rat) ]

    Gene ID: 79011, updated on 9-Dec-2024

    Summary

    Official Symbol
    Camkvprovided by RGD
    Official Full Name
    CaM kinase-like vesicle-associatedprovided by RGD
    Primary source
    RGD:621488
    See related
    EnsemblRapid:ENSRNOG00000058938 AllianceGenome:RGD:621488
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    1G5
    Summary
    Enables calmodulin binding activity. Predicted to be involved in modulation of chemical synaptic transmission; regulation of modification of postsynaptic structure; and signal transduction. Is active in postsynapse. Orthologous to human CAMKV (CaM kinase like vesicle associated). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 338.3) See more
    Orthologs
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    Genomic context

    See Camkv in Genome Data Viewer
    Location:
    8q32
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (117505439..117519785)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (108626821..108641169)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (116715755..116730061)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene macrophage stimulating 1 receptor Neighboring gene uncharacterized LOC134480232 Neighboring gene actin-like 11 Neighboring gene TRAF-interacting protein Neighboring gene ubiquitin-like modifier activating enzyme 7

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Interactions

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables ATP binding  
    enables calcium/calmodulin-dependent protein kinase activity  
    enables calmodulin binding  
    enables calmodulin binding PubMed 
    enables calmodulin binding  
    enables protein kinase activity  
    Component Evidence Code Pubs
    is_active_in cytoplasm  
    located_in cytoplasmic vesicle membrane  
    located_in glutamatergic synapse  
    is_active_in glutamatergic synapse  
    located_in plasma membrane  
    is_active_in postsynapse PubMed 
    is_active_in synapse  

    General protein information

    Preferred Names
    caM kinase-like vesicle-associated protein
    Names
    vesicle-associated calmodulin-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_024000.1NP_076490.1  caM kinase-like vesicle-associated protein

      See identical proteins and their annotated locations for NP_076490.1

      Status: PROVISIONAL

      Source sequence(s)
      L22557
      UniProtKB/Swiss-Prot
      Q63092
      UniProtKB/TrEMBL
      A0A0G2K1R5
      Related
      ENSRNOP00000071953.1, ENSRNOT00000090239.3
      Conserved Domains (2) summary
      PRK12495
      Location:368445
      PRK12495; hypothetical protein; Provisional
      cd14088
      Location:22286
      STKc_CaMK_like; Catalytic domain of an Uncharacterized group of Serine/Threonine kinases with similarity to Calcium/calmodulin-dependent protein kinases

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      117505439..117519785
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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