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    Zfpl Zinc finger protein like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 691468, updated on 27-Dec-2024

    Summary

    Official Symbol
    Zfplprovided by RGD
    Official Full Name
    Zinc finger protein likeprovided by RGD
    Primary source
    RGD:1561277
    See related
    EnsemblRapid:ENSRNOG00000051868 AllianceGenome:RGD:1561277
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1561277
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Thymus (RPKM 65.2), Brain (RPKM 50.2) and 9 other tissues See more
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    Genomic context

    See Zfpl in Genome Data Viewer
    Location:
    10q22
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (44104883..44121131)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (43605295..43647137)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (45169381..45185463)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene cofilin-2, pseudogene 1 Neighboring gene olfactory receptor family 9 subfamily E member 1B Neighboring gene zinc finger protein 717-like Neighboring gene uncharacterized LOC134480798 Neighboring gene zinc finger protein 39

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    is_active_in nucleus  

    General protein information

    Preferred Names
    uncharacterized protein LOC691468; zinc finger protein 383
    Names
    zinc finger protein 300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001430295.1NP_001417224.1  uncharacterized protein LOC691468

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000010
      UniProtKB/TrEMBL
      A6HEV0

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      44104883..44121131
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006246531.4XP_006246593.3  zinc finger protein 383

      Related
      ENSRNOP00000070971.3, ENSRNOT00000081224.3
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