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    Fam43a family with sequence similarity 43, member A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 288031, updated on 9-Dec-2024

    Summary

    Official Symbol
    Fam43aprovided by RGD
    Official Full Name
    family with sequence similarity 43, member Aprovided by RGD
    Primary source
    RGD:1304790
    See related
    EnsemblRapid:ENSRNOG00000001728 AllianceGenome:RGD:1304790
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1304790
    Summary
    Orthologous to human FAM43A (family with sequence similarity 43 member A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Fam43a in Genome Data Viewer
    Location:
    11q22
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (83633165..83636313, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (70128253..70131401, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (73676601..73679003, complement)

    Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120095680 Neighboring gene uncharacterized LOC102549085 Neighboring gene uncharacterized LOC134481097 Neighboring gene large ribosomal subunit protein uL22-like Neighboring gene large 60S subunit nuclear export GTPase 1 Neighboring gene uncharacterized LOC102548792 Neighboring gene transmembrane protein 44

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039002.2NP_001034091.1  protein FAM43A

      See identical proteins and their annotated locations for NP_001034091.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000011
      UniProtKB/TrEMBL
      F1M8K2, Q4KLG0
      Related
      ENSRNOP00000002355.6, ENSRNOT00000002355.9
      Conserved Domains (1) summary
      pfam14719
      Location:69256
      PID_2; Phosphotyrosine interaction domain (PTB/PID)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086029.1 Reference GRCr8

      Range
      83633165..83636313 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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