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hypothetical protein HALLA_20005 (plasmid) [Halostagnicola larsenii XH-48]

GenBank: AHG02186.1

Identical Proteins FASTA Graphics 

LOCUS       AHG02186                 575 aa            linear   BCT 26-JUL-2016
DEFINITION  hypothetical protein HALLA_20005 (plasmid) [Halostagnicola larsenii
            XH-48].
ACCESSION   AHG02186
VERSION     AHG02186.1
DBLINK      BioProject: PRJNA71415
            BioSample: SAMN00117518
DBSOURCE    accession CP007058.1
KEYWORDS    .
SOURCE      Halostagnicola larsenii XH-48
  ORGANISM  Halostagnicola larsenii XH-48
            Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group;
            Halobacteria; Halobacteriales; Natrialbaceae; Halostagnicola.
REFERENCE   1  (residues 1 to 575)
  AUTHORS   Anderson,I., Huntemann,M., Han,J., Chen,A., Kyrpides,N.,
            Mavromatis,K., Markowitz,V., Palaniappan,K., Ivanova,N.,
            Schaumberg,A., Pati,A., Liolios,K., Nordberg,H.P., Cantor,M.N.,
            Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JAN-2014) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 01/10/2014 10:56:10
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.3 (rev. 423251)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,246
            CDS                          :: 4,171
            Pseudo Genes                 :: 19
            rRNAs                        :: 6 (5S, 16S, 23S)
            tRNAs                        :: 49
            ncRNA                        :: 1
            Frameshifted Genes           :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Halostagnicola larsenii XH-48"
                     /strain="XH-48"
                     /isolation_source="sediment of saline lake"
                     /culture_collection="DSM:17691"
                     /type_material="type strain of Halostagnicola larsenii"
                     /db_xref="taxon:797299"
                     /plasmid="unnamed"
                     /geo_loc_name="China: Lake Xilinhot, Inner Mongolia"
                     /lat_lon="43.916 N 115.616 E"
     Protein         1..575
                     /product="hypothetical protein"
     Region          <26..180
                     /region_name="DdpA"
                     /note="ABC-type transport system, periplasmic component
                     [Amino acid transport and metabolism]; COG0747"
                     /db_xref="CDD:440510"
     Region          216..>574
                     /region_name="DdpA"
                     /note="ABC-type transport system, periplasmic component
                     [Amino acid transport and metabolism]; COG0747"
                     /db_xref="CDD:440510"
     CDS             1..575
                     /locus_tag="HALLA_20005"
                     /coded_by="CP007058.1:46382..48109"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /transl_table=11
ORIGIN      
        1 magggviagt iggsalhrit tdnttnqvsv tilslpadnd qrsseiaref eknlravgin
       61 asieprseae llraillehd fdcyvtrrrs dhdpdflyem fhssydpeag wqnpfgftnp
      121 qvdelleqqr smdgdertet vnellnklaq thpivpicvs aerrvvrtdr fdgwddhsle
      181 srlgylglep nayewsdged vvltailtdt ratknlnplt athhdkgtfv dllydslave
      241 ddgeirpwla eswewdgava tvylrtgcqf hddhpvtard veftyeflad tslgeqdahs
      301 ptpryrglvd avervsavdd htvqiridah adigerafti pilprhvwep evsnrlengq
      361 eptqgtweiv tadsipkigs gpyafvnqep rsslqferfd qhftrresvd lpeptpdelv
      421 flvglnsglv mselqdgnad mtasrmavge igdtsdrsle liepatprfy hvgfnvrnap
      481 fsspnfrevi aslidreslv seifngqatp tvtpvtdewt pedlewdgea pyapffrksd
      541 etgdedsgnl dveqvkrafe rygfqysddg erlvr
//
Feature
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