LOCUS EDM07122 314 aa linear ROD 26-JUL-2016
DEFINITION rCG38019, isoform CRA_a [Rattus norvegicus].
ACCESSION EDM07122
VERSION EDM07122.1
DBLINK BioProject: PRJNA13999
BioSample: SAMN03000701
DBSOURCE accession CH473969.2
KEYWORDS .
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (residues 1 to 314)
AUTHORS Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
TITLE Gene and alternative splicing annotation with AIR
JOURNAL Genome Res. 15 (1), 54-66 (2005)
PUBMED 15632090
REFERENCE 2 (residues 1 to 314)
AUTHORS Mural,R.J., Li,P.W., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
Barnstead,M., Chin,S.H., Dew,I., Evans,C.A., Ferriera,S.,
Flanigan,M., Fosler,C., Glodek,A., Gu,Z., Holt,R.A., Jennings,D.,
Kraft,C.L., Lu,F., Nguyen,T., Nusskern,D.R., Pfannkoch,C.M.,
Sitter,C., Sutton,G.G., Venter,J.C., Wang,Z., Woodage,T.,
Zheng,X.H. and Zhong,F.
TITLE Direct Submission
JOURNAL Submitted (05-JUL-2005) Celera Genomics, 45 W. Gude Dr., Rockville,
MD 20850, USA
REFERENCE 3 (residues 1 to 314)
AUTHORS Mural,R.J., Li,P.W., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
Barnstead,M., Chin,S.H., Dew,I., Evans,C.A., Ferriera,S.,
Flanigan,M., Fosler,C., Glodek,A., Gu,Z., Holt,R.A., Jennings,D.,
Kraft,C.L., Lu,F., Nguyen,T., Nusskern,D.R., Pfannkoch,C.M.,
Sitter,C., Sutton,G.G., Venter,J.C., Wang,Z., Woodage,T.,
Zheng,X.H. and Zhong,F.
TITLE Direct Submission
JOURNAL Submitted (02-SEP-2005) Celera Genomics, 45 W. Gude Dr., Rockville,
MD 20850, USA
COMMENT Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..314
/organism="Rattus norvegicus"
/strain="BN; Sprague-Dawley"
/db_xref="taxon:10116"
/chromosome="X"
Protein 1..314
/product="rCG38019, isoform CRA_a"
Region 23..304
/region_name="7tm_GPCRs"
/note="seven-transmembrane G protein-coupled receptor
superfamily; cl28897"
/db_xref="CDD:475119"
Region 25..49
/region_name="TM helix 1"
/note="TM helix 1 [structural motif]"
/db_xref="CDD:410628"
Region 58..79
/region_name="TM helix 2"
/note="TM helix 2 [structural motif]"
/db_xref="CDD:410628"
Region 95..117
/region_name="TM helix 3"
/note="TM helix 3 [structural motif]"
/db_xref="CDD:410628"
Region 139..155
/region_name="TM helix 4"
/note="TM helix 4 [structural motif]"
/db_xref="CDD:410628"
Region 185..208
/region_name="TM helix 5"
/note="TM helix 5 [structural motif]"
/db_xref="CDD:410628"
Region 231..253
/region_name="TM helix 6"
/note="TM helix 6 [structural motif]"
/db_xref="CDD:410628"
Region 273..298
/region_name="TM helix 7"
/note="TM helix 7 [structural motif]"
/db_xref="CDD:410628"
CDS 1..314
/locus_tag="rCG_38019"
/coded_by="join(CH473969.2:4342116..4343034,
CH473969.2:4343045..4343070)"
/note="gene_id=rCG38019.0 transcript_id=rCT38019.0
protein_id=rCP32560.0 isoform=CRA_a"
ORIGIN
1 mgsnststve sncnainvtf qnslyattyi fifipgllan saalwvlfrf iskknkaiif
61 minlsvadla hilslplriy yyinrhwpfq ralcllcfyl kylnmyasif fltcislqrc
121 lfllkpfrar nwkrrydvgi saavwiivgt aclpfpimrs aglanntdsc fadlgykqmd
181 plvlvtmiti aelagfvipv ltiacctwkt tvslkhppia fqgiserkka lrmvfmcaav
241 fvicftpyhi nfifytmvke niitscpivk samyfhpfsl claslcclld pilyyfmase
301 frdqlsplll vlvs
//