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C-Jun-amino-terminal kinase-interacting protein 3 isoform X3 [Rattus norvegicus]

NCBI Reference Sequence: XP_008765789.1

Identical Proteins FASTA Graphics 

LOCUS       XP_008765789            1339 aa            linear   ROD 22-FEB-2024
DEFINITION  C-Jun-amino-terminal kinase-interacting protein 3 isoform X3
            [Rattus norvegicus].
ACCESSION   XP_008765789
VERSION     XP_008765789.1
DBLINK      BioProject: PRJNA1074393
DBSOURCE    REFSEQ: accession XM_008767567.3
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086028) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1339
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     Protein         1..1339
                     /product="C-Jun-amino-terminal kinase-interacting protein
                     3 isoform X3"
                     /calculated_mol_wt=147541
     Region          29..184
                     /region_name="Jnk-SapK_ap_N"
                     /note="JNK_SAPK-associated protein-1; pfam09744"
                     /db_xref="CDD:462875"
     Region          <399..>563
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          419..487
                     /region_name="JIP_LZII"
                     /note="JNK-interacting protein leucine zipper II;
                     pfam16471"
                     /db_xref="CDD:465127"
     Region          <867..>971
                     /region_name="PRK12495"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:183558"
     Region          958..>1174
                     /region_name="WD40_2"
                     /note="WD40 repeated domain; pfam19056"
                     /db_xref="CDD:465964"
     CDS             1..1339
                     /gene="Mapk8ip3"
                     /gene_synonym="JIP-3; JIP3; JSAP1"
                     /coded_by="XM_008767567.3:679..4698"
                     /db_xref="GeneID:302983"
                     /db_xref="RGD:1563691"
ORIGIN      
        1 mmeiqmdegg gvvvyqddyc sgsvmservs glagsiyref erlihcydee vvkelmplvv
       61 nvlenldsvl senqehevel ellredneql ltqyerekal rkqaeekfie fedaleqekk
      121 elqiqvehye fqtrqlelka knyadqisrl eeresemkke ynalhqrhte miqtyvehie
      181 rskmqqvggg gqtesslpgr sprqswrksr kerptslnvf pladgmvraq mggklvpagd
      241 hwhlsdlgql qssssyqcpn demsesgqss aaatpsttgt ksntptssvp saavtplnes
      301 lqplgdygsv tknnkrarek rnsrnmevqv tqemrnvsig mgssdewsdv qdiidstpel
      361 dvcpetrldr tgssptqgiv nkafgintds lyhelstags evigdvdega dllgefsgmg
      421 kevgnlllen sqlletknal nvvkndliak vdqlsgeqev lkgeleaakq akvklenrik
      481 eleeelkrvk seavtarrep reevedvssy lcteldkipm aqrrrftrve marvlmernq
      541 ykerlmelqe avrwtemira srehpsvqek kkstiwqffs rlfssssspp pakrsypsvn
      601 ihykspttag fsqrrnhalc qisagsrple ffpdddctss arreqkreqy rqvrehvrnd
      661 dgrlqacgws lpakykqlsp nggqedtrmk nvpvpvycrp lvekdpstkl wcaagvnlsg
      721 wkpneedssn gpkpapgrdp ltcdregege pksthpspek kkakevpead atssrvwilt
      781 stlttskvvi idanqpgtvv dqftvcnahv lcissipaas dsdyppgdmf ldsdvnpeds
      841 gadgvlagit lvgcatrcnv prsncssrgd tpvldkgqgd vaatangkvn psqsteeate
      901 atevpdpgps eseattvrpg pltehvftdp aptqssstqp asengsesdg sivqpqveps
      961 gessattssa aptmwlgaqn gwlyvhsava nwkkclhsik lkdsvlslvh vkgrvlvala
     1021 dgtlaifhrg edgqwdlsny hlmdlghphh sircmavvdd rvwcgyknkv hviqpktmqi
     1081 eksfdahprr esqvrqlawi gdgvwvsirl dstlrlyhah thqhlqdvdi epyvskmlgt
     1141 gklgfsfvri talliagnrl wvgtgngvvi sipltetvvl hrgqllglra nktsptsgeg
     1201 trpggiihvy gddssdktas sfipycsmaq aqlcfhghrd avkffvsvpg nvlatlngsv
     1261 ldspsegpgp aapaadaegq klknalvlsg gegyidfrig dgeddeteeg tgdvnqtkps
     1321 lskaershii vwqvsytpe
//
Feature
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Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the Mapk8ip3 gene (XM_008767567.3).
  • RefSeq protein isoforms
    See 16 reference sequence protein isoforms for the Mapk8ip3 gene.

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