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C2 domain-containing protein 2 isoform X5 [Rattus norvegicus]

NCBI Reference Sequence: XP_017453502.1

Identical Proteins FASTA Graphics 

LOCUS       XP_017453502             638 aa            linear   ROD 22-FEB-2024
DEFINITION  C2 domain-containing protein 2 isoform X5 [Rattus norvegicus].
ACCESSION   XP_017453502
VERSION     XP_017453502.1
DBLINK      BioProject: PRJNA1074393
DBSOURCE    REFSEQ: accession XM_017598013.3
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086029) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     Protein         1..638
                     /product="C2 domain-containing protein 2 isoform X5"
                     /calculated_mol_wt=69577
     Region          53..230
                     /region_name="SMP_C2CD2"
                     /note="synaptotagmin-like mitochondrial-lipid-binding
                     protein (SMP) domain found in C2 domain-containing protein
                     2 (C2CD2); cd21682"
                     /db_xref="CDD:439238"
     Site            order(67,70..71,75,79,100,105,126,131,133,135,155,157,161,
                     163,174,176,178,188,212,215..216,221,223..226)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:439238"
     Region          261..386
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..638
                     /gene="C2cd2"
                     /gene_synonym="RGD735112"
                     /coded_by="XM_017598013.3:315..2231"
                     /db_xref="GeneID:304055"
                     /db_xref="RGD:735112"
ORIGIN      
        1 mgswlgevqw lflvslfvaa lgtvglylaq walakarppp rrraepdelr rqesdtllsw
       61 iltrdswgnq wlaawvtaln yeaersggpl rlsfqkdprp qslqltvgev ssvvksaqek
      121 mvichvvgen lqflvsagpa sttgsecqly dvqlspfhlk vqfhmqekre diqitwsftc
      181 apetairiqp qapgekqvle vnvlsealkd lfkhlvsaas psvflstkpm qakeaqtlqc
      241 tsstaqepcp pkpprahelk lqvknirvsl lnhpgasgis hmcvaqlnep aqrfistlvr
      301 nttdlsweee ftfelnaksk elllqisqee csseglmgia tvhldlfrkq pngpqtfrlv
      361 sgtepessvl gsvtaefsyv epgdlkswpa pplvsatkie kdrtvmpcgt vvttvtavkt
      421 kprfdtgras plssespvrt pikvkviekd isvqaischs apvsktlsss dtellvlnss
      481 dpvaevairq lsessklklk sprkkstiii sgisktslsq dhsaalmlny aasmdstnqg
      541 eatsalchpe ateasattpp eenepaqalp vlepreddld swdlekespv aswsgpvlqd
      601 pdgdelsess lstselgaik khkgslcqpe litytkes
//
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