Warning: The NCBI web site requires JavaScript to function. more...
An official website of the United States government
The .gov means it's official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you're on a federal government site.
The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.
NCBI Reference Sequence: XP_038937351.1
Identical Proteins FASTA Graphics
LOCUS XP_038937351 973 aa linear ROD 22-FEB-2024 DEFINITION NLR family member X1 isoform X1 [Rattus norvegicus]. ACCESSION XP_038937351 VERSION XP_038937351.1 DBLINK BioProject: PRJNA1074393 DBSOURCE REFSEQ: accession XM_039081423.2 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_086026) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036323735.1-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/09/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..973 /organism="Rattus norvegicus" /strain="BN/NHsdMcwi" /bio_material="RGD 61498" /db_xref="taxon:10116" /chromosome="8" /sex="male" /tissue_type="kidney, spleen, liver" /geo_loc_name="USA: Wisconsin, Milwaukee" /lat_lon="43.05 N 88.04 W" /collected_by="Rebecca Schilling, Melinda Dwinell" Protein 1..973 /product="NLR family member X1 isoform X1" /calculated_mol_wt=107459 Region 41..965 /region_name="NACHT" /note="Predicted NTPase, NACHT family domain [Signal transduction mechanisms]; COG5635" /db_xref="CDD:444362" Region 158..318 /region_name="P-loop containing Nucleoside Triphosphate Hydrolases" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; cl38936" /db_xref="CDD:476819" Region 696..724 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 725..746 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 747..770 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region <751..881 /region_name="RNA1" /note="Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis]; COG5238" /db_xref="CDD:444072" Region 771..806 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 807..834 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 863..884 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" CDS 1..973 /gene="Nlrx1" /gene_synonym="RGD1311293" /coded_by="XM_039081423.2:597..3518" /db_xref="GeneID:315599" /db_xref="RGD:1311293" ORIGIN 1 mrwgchlprt swgsglgrtv plpdelriqs swpfkgvhhp lrpprafirh hgnsadsapp 61 pgrhgqlfrs isateaiqrh rrnltewfsr lpreerqfgp tfaldtvhvd pvirestpdd 121 llrpstelat ghqrtqaelp plalsqlfdp dacgrrvqtv vlygtvgtgk stlvrkmvld 181 wcygrlpafe llipfscedl sslgstpasl cqlvtqrytp lkevlplmna agsrllfvlh 241 glerlnldfr lagtglcsdp eepgapaaim vnllrkymlp easilvttrp saigripsky 301 vgrygeicgf sdtnlqklyf qlrlnqpdcg ygaggtgvsv tpaqrdnliq mlsrnleghh 361 qiaaacflps ycwlvcatlh flhaptsagq tltsiytsfl rlnfngetld stdpsnlslm 421 syaartmgkl ayegvssrkt yfseedvrgc leagikteee fqllqifrrd alrfflapcv 481 epghlgtfvf tvpamqeyla alyivlglrk talqrvgkev fefvgrvged vslvlgivak 541 llplrilpll fnllkvvprv fgrmvsksre avaqamvlem freedyyndd vldqmgasil 601 gvegprrhpd eppedevfel fpmfmsglls ahnravlaql gcpiknldal enaqaikkkl 661 gkmgrqvlpp selldhlffh yefqnqrfsa evlgslrqln lagvrmtplk ctvvasvlgs 721 grhpldevnl ascqldpagl htlmpvllra rklglqlnnl gpeacrdlrd lllhdqcqit 781 tlrlsnnplt aagvgvlmdg lagntsvthl sllhtdlgde glellaaqld rnkqlqelnv 841 ayngagdtva lalakaarkh pslellhlyf nelssegrqv lrdlggsgeg garvvaslte 901 gtavseywsv ilsevqrnln swdpvrvqrh lklllrdled srgatlnpwr kaqllrvese 961 vktlleqlgg sgh //
Whole sequence Selected region from: to:
Conserved Domains
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on