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    FCHO2 FCH and mu domain containing endocytic adaptor 2 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100173197, updated on 3-Dec-2024

    Summary

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    Gene symbol
    FCHO2
    Gene description
    FCH and mu domain containing endocytic adaptor 2
    Locus tag
    CR201_G0016056
    See related
    Ensembl:ENSPPYG00000015546
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs
    human mouse all
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    Genomic context

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    See FCHO2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 4 NC_071989.2 (80424779..80554133)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 5 NC_071990.1 (80459882..80589218)

    Chromosome 4 - NC_071989.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129059426 Neighboring gene transportin 1 Neighboring gene large ribosomal subunit protein eL33-like Neighboring gene CTD nuclear envelope phosphatase 1-like Neighboring gene calcineurin B homologous protein 1-like Neighboring gene transmembrane protein 171 Neighboring gene small ribosomal subunit protein uS3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • DKFZp469O0714

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in clathrin coat assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in clathrin-dependent endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in clathrin-coated pit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in clathrin-coated vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-BAR domain only protein 2
    Names
    FCH domain only 2
    FCH domain only protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001132756.1 → NP_001126228.1  F-BAR domain only protein 2

      See identical proteins and their annotated locations for NP_001126228.1

      Status: PROVISIONAL

      Source sequence(s)
      CR859949
      UniProtKB/Swiss-Prot
      Q5R807
      UniProtKB/TrEMBL
      A0A2J8VTK9, A0A8I5SZ22
      Related
      ENSPPYP00000017377.3, ENSPPYT00000018082.3
      Conserved Domains (2) summary
      cd07673
      Location:5 → 273
      F-BAR_FCHO2; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only 2 protein
      cd09267
      Location:544 → 810
      FCHo2_MHD; mu-homology domain (MHD) of F-BAR domain-containing Fer/Cip4 homology domain-only protein 2 (FCH domain only 2 or FCHo2) and similar proteins

    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_071989.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      80424779..80554133
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054555094.1 → XP_054411069.1  F-BAR domain only protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A2J8VTK9, A0A8I5SZ22

    2. XM_054555095.1 → XP_054411070.1  F-BAR domain only protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A2J8VTK9, A0A8I5SZ22
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5R807.1 GenPept UniProtKB/Swiss-Prot:Q5R807

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials