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    LRRC51 leucine rich repeat containing 51 [ Ochotona princeps (American pika) ]

    Gene ID: 101521569, updated on 29-May-2024

    Summary

    Gene symbol
    LRRC51
    Gene description
    leucine rich repeat containing 51
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Ochotona princeps
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
    Orthologs
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    Genomic context

    See LRRC51 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 4 NC_080835.1 (51943657..51965907)
    102 previous assembly OchPri4.0 (GCF_014633375.1) 1 NC_050536.1 (59545925..59568328, complement)

    Chromosome 4 - NC_080835.1Genomic Context describing neighboring genes Neighboring gene interleukin 18 binding protein Neighboring gene nuclear mitotic apparatus protein 1 Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 Neighboring gene transmembrane O-methyltransferase

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    leucine-rich repeat-containing protein 51
    NP_001269089.1
    XP_012783748.1
    XP_058518211.1
    XP_058518212.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001282160.2NP_001269089.1  leucine-rich repeat-containing protein 51 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAUDYK010000005
      Conserved Domains (2) summary
      sd00033
      Location:5280
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80139
      LRR_8; Leucine rich repeat
    2. NM_001430123.1NP_001417052.1  leucine-rich repeat-containing protein 51 isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAUDYK010000005

    RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mOchPri1.hap1

    Genomic

    1. NC_080835.1 Reference mOchPri1.hap1

      Range
      51943657..51965907
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_058662228.1XP_058518211.1  leucine-rich repeat-containing protein 51 isoform X2

    2. XM_058662229.1XP_058518212.1  leucine-rich repeat-containing protein 51 isoform X3

    3. XM_012928294.2XP_012783748.1  leucine-rich repeat-containing protein 51 isoform X1

      Conserved Domains (3) summary
      sd00033
      Location:5280
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:103141
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:80139
      LRR_8; Leucine rich repeat