U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    smim1 small integral membrane protein 1 [ Lepisosteus oculatus (spotted gar) ]

    Gene ID: 102690037, updated on 21-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    smim1
    Gene description
    small integral membrane protein 1
    See related
    Ensembl:ENSLOCG00000005888
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lepisosteus oculatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See smim1 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_09 current fLepOcu1.hap2 (GCF_040954835.1) 25 NC_090720.1 (3899034..3902060, complement)
    101 previous assembly LepOcu1 (GCF_000242695.1) Linkage Group LG25 NC_023203.1 (10562303..10565333)

    Chromosome 25 - NC_090720.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 104 Neighboring gene leucine rich repeat containing 47 Neighboring gene mitotic arrest deficient 2 like 2 Neighboring gene coiled-coil domain-containing protein 27

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    small integral membrane protein 1
    Names
    small integral membrane protein 1 (Vel blood group)

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_040954835.1-RS_2024_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLepOcu1.hap2

    Genomic

    1. NC_090720.1 Reference fLepOcu1.hap2

      Range
      3899034..3902060 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006642068.3 → XP_006642131.1  small integral membrane protein 1

      UniProtKB/TrEMBL
      W5MFF3
      Related
      ENSLOCP00000007112.1
      Conserved Domains (1) summary
      pfam15875
      Location:3 → 74
      DUF4731; Domain of unknown function (DUF4731)

    2. XM_015336951.2 → XP_015192437.1  small integral membrane protein 1

      UniProtKB/TrEMBL
      W5MFF3
      Conserved Domains (1) summary
      pfam15875
      Location:3 → 74
      DUF4731; Domain of unknown function (DUF4731)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.