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    LOC103593500 ATP-binding cassette sub-family A member 2 [ Galeopterus variegatus (Sunda flying lemur) ]

    Gene ID: 103593500, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC103593500
    Gene description
    ATP-binding cassette sub-family A member 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Galeopterus variegatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Dermoptera; Cynocephalidae; Galeopterus
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    Genomic context

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    See LOC103593500 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    41
    Annotation release Status Assembly Chr Location
    100 current G_variegatus-3.0.2 (GCF_000696425.1) Unplaced Scaffold NW_007727471.1 (344122..357917)

    NW_007727471.1Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2908 Neighboring gene ATP-binding cassette sub-family A member 2-like Neighboring gene fucosyltransferase 7 Neighboring gene chloride intracellular channel 3 Neighboring gene PAXX non-homologous end joining factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_007727471 unplaced scaffold reference G_variegatus-3.0.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables lipid transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-binding cassette sub-family A member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Galeopterus variegatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference G_variegatus-3.0.2 Primary Assembly

    Genomic

    1. NW_007727471.1 Reference G_variegatus-3.0.2 Primary Assembly

      Range
      344122..357917
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008576497.1 → XP_008574719.1  ATP-binding cassette sub-family A member 2

      Conserved Domains (4) summary
      TIGR01188
      Location:565 → 889
      drrA; daunorubicin resistance ABC transporter ATP-binding subunit
      cd03263
      Location:1620 → 1843
      ABC_subfamily_A; ATP-binding cassette domain of the lipid transporters, subfamily A
      COG1131
      Location:1619 → 1904
      CcmA; ABC-type multidrug transport system, ATPase component [Defense mechanisms]
      pfam12698
      Location:1297 → 1544
      ABC2_membrane_3; ABC-2 family transporter protein
    Nucleotide Protein
    Heading Accession and Version

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