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    LOC111253468 sodium/potassium-transporting ATPase subunit alpha-like [ Varroa destructor (honeybee mite) ]

    Gene ID: 111253468, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC111253468
    Gene description
    sodium/potassium-transporting ATPase subunit alpha-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Varroa destructor
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Mesostigmata; Gamasina; Dermanyssoidea; Varroidae; Varroa
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    Genomic context

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    See LOC111253468 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current Vdes_3.0 (GCF_002443255.1) Unplaced Scaffold NW_019211459.1 (17219306..17252459)

    NW_019211459.1Genomic Context describing neighboring genes Neighboring gene anoctamin-7-like Neighboring gene eukaryotic initiation factor 4A-I-like Neighboring gene WD repeat and FYVE domain containing 2 Neighboring gene mitochondrial ribosomal protein L51 Neighboring gene uncharacterized LOC111252433 Neighboring gene neurexin-1-like Neighboring gene Electron transfer flavoprotein beta subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019211459 Unplaced Scaffold Reference Vdes_3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables P-type sodium:potassium-exchanging transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular potassium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular sodium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in potassium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion export across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium/potassium-transporting ATPase subunit alpha-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Varroa destructor Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Vdes_3.0 Primary Assembly

    Genomic

    1. NW_019211459.1 Reference Vdes_3.0 Primary Assembly

      Range
      17219306..17252459
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022812869.1 → XP_022668604.1  sodium/potassium-transporting ATPase subunit alpha-like isoform X3

      UniProtKB/TrEMBL
      A0A7M7KNS1
      Conserved Domains (1) summary
      cd02608
      Location:75 → 1033
      P-type_ATPase_Na-K_like; alpha-subunit of Na(+)/K(+)-ATPases and of gastric H(+)/K(+)-ATPase, similar to the human Na(+)/K(+)-ATPase alpha subunits 1-4

    2. XM_022812870.1 → XP_022668605.1  sodium/potassium-transporting ATPase subunit alpha-like isoform X4

      UniProtKB/TrEMBL
      A0A7M7KP34
      Conserved Domains (1) summary
      cd02608
      Location:22 → 980
      P-type_ATPase_Na-K_like; alpha-subunit of Na(+)/K(+)-ATPases and of gastric H(+)/K(+)-ATPase, similar to the human Na(+)/K(+)-ATPase alpha subunits 1-4

    3. XM_022812871.1 → XP_022668606.1  sodium/potassium-transporting ATPase subunit alpha-like isoform X5

      UniProtKB/TrEMBL
      A0A7M7KLB0
      Conserved Domains (1) summary
      cl27747
      Location:43 → 864
      E1-E2_ATPase; E1-E2 ATPase

    4. XM_022812868.1 → XP_022668603.1  sodium/potassium-transporting ATPase subunit alpha-like isoform X2

      UniProtKB/TrEMBL
      A0A7M7MDL5
      Conserved Domains (1) summary
      cd02608
      Location:78 → 1036
      P-type_ATPase_Na-K_like; alpha-subunit of Na(+)/K(+)-ATPases and of gastric H(+)/K(+)-ATPase, similar to the human Na(+)/K(+)-ATPase alpha subunits 1-4

    5. XM_022812867.1 → XP_022668602.1  sodium/potassium-transporting ATPase subunit alpha-like isoform X1

      UniProtKB/TrEMBL
      A0A7M7L1B1
      Conserved Domains (1) summary
      cd02608
      Location:78 → 1036
      P-type_ATPase_Na-K_like; alpha-subunit of Na(+)/K(+)-ATPases and of gastric H(+)/K(+)-ATPase, similar to the human Na(+)/K(+)-ATPase alpha subunits 1-4
    Nucleotide Protein
    Heading Accession and Version

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