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    Clec11a C-type lectin domain containing 11A [ Rattus rattus (black rat) ]

    Gene ID: 116892217, updated on 18-Mar-2024

    Summary

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    Gene symbol
    Clec11a
    Gene description
    C-type lectin domain containing 11A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus rattus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    SCGF
    Orthologs
    human mouse all
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    Genomic context

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    See Clec11a in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current Rrattus_CSIRO_v1 (GCF_011064425.1) 2 NC_046155.1 (155222074..155226394)

    Chromosome 2 - NC_046155.1Genomic Context describing neighboring genes Neighboring gene synaptotagmin 3 Neighboring gene chromosome 2 C19orf81 homolog Neighboring gene SH3 and multiple ankyrin repeat domains 1 Neighboring gene ribosome production factor 1-like Neighboring gene G protein-coupled receptor 32

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046155.1 Chromosome 2 Reference Rrattus_CSIRO_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation and characterization of a cDNA for human mouse, and rat full-length stem cell growth factor, a new member of C-type lectin superfamily. Mio H, et al. Biochem Biophys Res Commun, 1998 Aug 10. PMID 9705843

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    C-type lectin domain family 11 member A
    Names
    Stem cell growth factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rattus rattus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rrattus_CSIRO_v1 Primary Assembly

    Genomic

    1. NC_046155.1 Reference Rrattus_CSIRO_v1 Primary Assembly

      Range
      155222074..155226394
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032893777.1 → XP_032749668.1  C-type lectin domain family 11 member A isoform X1

      Conserved Domains (1) summary
      cl02432
      Location:252 → 396
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    2. XM_032893778.1 → XP_032749669.1  C-type lectin domain family 11 member A isoform X2

      Conserved Domains (1) summary
      cl02432
      Location:182 → 326
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    Nucleotide Protein
    Heading Accession and Version

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