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    Gjb2 gap junction protein beta 2 [ Rattus rattus (black rat) ]

    Gene ID: 116913737, updated on 18-Mar-2024

    Summary

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    Gene symbol
    Gjb2
    Gene description
    gap junction protein beta 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus rattus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Orthologs
    human mouse all
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    Genomic context

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    See Gjb2 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current Rrattus_CSIRO_v1 (GCF_011064425.1) 12 NC_046165.1 (67711529..67713728)

    Chromosome 12 - NC_046165.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L23a-like Neighboring gene gap junction protein beta 6 Neighboring gene dual specificity protein phosphatase 5 Neighboring gene gap junction protein alpha 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046165.1 Chromosome 12 Reference Rrattus_CSIRO_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and tissue distribution of a second protein of hepatic gap junctions, Cx26, as deduced from its cDNA. Zhang JT, et al. J Cell Biol, 1989 Dec. PMID 2557354, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell communication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of connexin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gap junction beta-2 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rattus rattus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rrattus_CSIRO_v1 Primary Assembly

    Genomic

    1. NC_046165.1 Reference Rrattus_CSIRO_v1 Primary Assembly

      Range
      67711529..67713728
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032918041.1 → XP_032773932.1  gap junction beta-2 protein

      Conserved Domains (1) summary
      pfam00029
      Location:2 → 215
      Connexin
    Nucleotide Protein
    Heading Accession and Version

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