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    Sprr3 small proline-rich protein 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 310575, updated on 9-Dec-2024

    Summary

    Official Symbol
    Sprr3provided by RGD
    Official Full Name
    small proline-rich protein 3provided by RGD
    Primary source
    RGD:1309589
    See related
    EnsemblRapid:ENSRNOG00000024046 AllianceGenome:RGD:1309589
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be located in Golgi apparatus and perinuclear region of cytoplasm. Orthologous to human SPRR3 (small proline rich protein 3). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 161.7) See more
    Orthologs
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    Genomic context

    See Sprr3 in Genome Data Viewer
    Location:
    2q34
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (180723038..180725695, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (178027743..178028501, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (192641472..192643942, complement)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene small proline-rich protein 2 like 2 Neighboring gene uncharacterized LOC108350274 Neighboring gene small proline-rich protein 1B Neighboring gene small proline-rich protein 1A Neighboring gene small proline-rich protein 4

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    small proline-rich protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001107686.2NP_001101156.1  small proline-rich protein 3

      See identical proteins and their annotated locations for NP_001101156.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000002
      UniProtKB/TrEMBL
      A6KMQ6, D3ZHQ6
      Conserved Domains (1) summary
      pfam02389
      Location:5136
      Cornifin; Cornifin (SPRR) family

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      180723038..180725695 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063281819.1XP_063137889.1  small proline-rich protein 3 isoform X1

      Related
      ENSRNOP00000037841.4, ENSRNOT00000030295.6