U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Vom1r98 vomeronasal 1 receptor 98 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 494294, updated on 9-Dec-2024

    Summary

    Symbol
    Vom1r98provided by RGD
    Full Name
    vomeronasal 1 receptor 98provided by RGD
    Primary source
    RGD:1549694
    See related
    AllianceGenome:RGD:1549694
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    V1ra8
    Summary
    Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; response to pheromone; and sensory perception of chemical stimulus. Predicted to be located in plasma membrane. Orthologous to human VN1R17P (vomeronasal 1 receptor 17 pseudogene). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Vom1r98 in Genome Data Viewer
    Location:
    4q34
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (123933196..123934140)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (122375967..122376911)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (121912352..121913296)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 97 Neighboring gene vomeronasal 1 receptor pseudogene 78 Neighboring gene vomeronasal 1 receptor pseudogene 79 Neighboring gene vomeronasal 1 receptor pseudogene 80

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables pheromone receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to pheromone IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    vomeronasal type-1 receptor 98
    Names
    vomernasal 1 receptor Vom1r98
    vomeronasal 1 receptor, A8
    vomeronasal V1r-type receptor V1ra8
    vomeronasal type-1 receptor A8

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001008948.1NP_001008948.1  vomeronasal type-1 receptor 98

      See identical proteins and their annotated locations for NP_001008948.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000004
      UniProtKB/Swiss-Prot
      Q5J3E5

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      123933196..123934140
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)