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    RPS9 ribosomal protein S9 [ Bos taurus (domestic cattle) ]

    Gene ID: 533892, updated on 1-Jan-2025

    Summary

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    Official Symbol
    RPS9provided by VGNC
    Official Full Name
    ribosomal protein S9provided by VGNC
    Primary source
    VGNC:VGNC:34152
    See related
    BGD:BT12885; Ensembl:ENSBTAG00000006487
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RPS9 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (63196979..63204297, complement)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene leukocyte immunoglobulin-like receptor subfamily A member 6 Neighboring gene leukocyte immunoglobulin-like receptor subfamily A member 6 Neighboring gene leukocyte immunoglobulin-like receptor subfamily B member 3 Neighboring gene tRNA splicing endonuclease subunit 34 Neighboring gene membrane bound O-acyltransferase domain containing 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ribosomal small subunit biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    small ribosomal subunit protein uS4
    Names
    40S ribosomal protein S9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101152.2 → NP_001094622.1  small ribosomal subunit protein uS4

      Status: PROVISIONAL

      Source sequence(s)
      BC147956
      UniProtKB/Swiss-Prot
      A6QLG5
      Related
      ENSBTAP00000008502.4, ENSBTAT00000008502.6
      Conserved Domains (1) summary
      PTZ00155
      Location:11 → 177
      PTZ00155; 40S ribosomal protein S9; Provisional

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      63196979..63204297 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024978366.2 → XP_024834134.1  small ribosomal subunit protein uS4 isoform X1

      UniProtKB/Swiss-Prot
      A6QLG5
      Conserved Domains (1) summary
      PTZ00155
      Location:11 → 177
      PTZ00155; 40S ribosomal protein S9; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A6QLG5.1 GenPept UniProtKB/Swiss-Prot:A6QLG5

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.