SNP Links for Gene (Select 100313841) - SNP

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Select item 14886505681.

rs1488650568 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:12725325 (GRCh38)
10:12767324 (GRCh37)
Canonical SPDI:: NC_000010.11:12725324:C:T
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.12725325C>T, NC_000010.10:g.12767324C>T, NR_031752.1:n.29G>A

Select item 14884680302.

rs1488468030 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:12726221 (GRCh38)
10:12768220 (GRCh37)
Canonical SPDI:: NC_000010.11:12726220:C:T
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.12726221C>T, NC_000010.10:g.12768220C>T

Select item 14868362163.

rs1486836216 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 10:12725613 (GRCh38)
10:12767612 (GRCh37)
Canonical SPDI:: NC_000010.11:12725612:A:C
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000010.11:g.12725613A>C, NC_000010.10:g.12767612A>C

Select item 14857790064.

rs1485779006 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 10:12727183 (GRCh38)
10:12769182 (GRCh37)
Canonical SPDI:: NC_000010.11:12727182:G:A,NC_000010.11:12727182:G:C
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000021/3 (GnomAD)
C=0.000342/1 (KOREAN)
HGVS:: NC_000010.11:g.12727183G>A, NC_000010.11:g.12727183G>C, NC_000010.10:g.12769182G>A, NC_000010.10:g.12769182G>C

Select item 14823511535.

rs1482351153 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:12725912 (GRCh38)
10:12767911 (GRCh37)
Canonical SPDI:: NC_000010.11:12725911:A:G
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.12725912A>G, NC_000010.10:g.12767911A>G

Select item 14813976096.

rs1481397609 [Homo sapiens]

Variant type:: DEL
Alleles:: GAG>- [Show Flanks]
Chromosome:: 10:12724934 (GRCh38)
10:12766933 (GRCh37)
Canonical SPDI:: NC_000010.11:12724933:GAG:
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.12724934_12724936del, NC_000010.10:g.12766933_12766935del

Select item 14810491267.

rs1481049126 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 10:12725011 (GRCh38)
10:12767010 (GRCh37)
Canonical SPDI:: NC_000010.11:12725010:C:G,NC_000010.11:12725010:C:T
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000010.11:g.12725011C>G, NC_000010.11:g.12725011C>T, NC_000010.10:g.12767010C>G, NC_000010.10:g.12767010C>T

Select item 14795734108.

rs1479573410 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:12727047 (GRCh38)
10:12769046 (GRCh37)
Canonical SPDI:: NC_000010.11:12727046:C:T
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000071/1 (TOMMO)
HGVS:: NC_000010.11:g.12727047C>T, NC_000010.10:g.12769046C>T

Select item 14787939759.

rs1478793975 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:12725344 (GRCh38)
10:12767343 (GRCh37)
Canonical SPDI:: NC_000010.11:12725343:A:G
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.12725344A>G, NC_000010.10:g.12767343A>G, NR_031752.1:n.10T>C

Select item 147864611910.

rs1478646119 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:12725032 (GRCh38)
10:12767031 (GRCh37)
Canonical SPDI:: NC_000010.11:12725031:C:T
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000054/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000026/7 (TOPMED)
T=0.000223/1 (Estonian)
HGVS:: NC_000010.11:g.12725032C>T, NC_000010.10:g.12767031C>T

Select item 147767101911.

rs1477671019 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:12725956 (GRCh38)
10:12767955 (GRCh37)
Canonical SPDI:: NC_000010.11:12725955:C:T
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000010.11:g.12725956C>T, NC_000010.10:g.12767955C>T

Select item 147751139812.

rs1477511398 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 10:12724902 (GRCh38)
10:12766901 (GRCh37)
Canonical SPDI:: NC_000010.11:12724901:G:T
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000010.11:g.12724902G>T, NC_000010.10:g.12766901G>T

Select item 147598224213.

rs1475982242 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 10:12726240 (GRCh38)
10:12768239 (GRCh37)
Canonical SPDI:: NC_000010.11:12726239:A:C,NC_000010.11:12726239:A:G
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.12726240A>C, NC_000010.11:g.12726240A>G, NC_000010.10:g.12768239A>C, NC_000010.10:g.12768239A>G

Select item 147538676714.

rs1475386767 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 10:12727018 (GRCh38)
10:12769017 (GRCh37)
Canonical SPDI:: NC_000010.11:12727017:G:C
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000010.11:g.12727018G>C, NC_000010.10:g.12769017G>C

Select item 147445320115.

rs1474453201 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:12726790 (GRCh38)
10:12768789 (GRCh37)
Canonical SPDI:: NC_000010.11:12726789:T:C
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.12726790T>C, NC_000010.10:g.12768789T>C

Select item 147290167516.

rs1472901675 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:12724846 (GRCh38)
10:12766845 (GRCh37)
Canonical SPDI:: NC_000010.11:12724845:C:T
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000447/2 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000446/2 (Estonian)
HGVS:: NC_000010.11:g.12724846C>T, NC_000010.10:g.12766845C>T

Select item 147265171417.

rs1472651714 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:12725340 (GRCh38)
10:12767339 (GRCh37)
Canonical SPDI:: NC_000010.11:12725339:C:T
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.00007/1 (GnomAD_exomes)
HGVS:: NC_000010.11:g.12725340C>T, NC_000010.10:g.12767339C>T, NR_031752.1:n.14G>A

Select item 147220931418.

rs1472209314 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:12725246 (GRCh38)
10:12767245 (GRCh37)
Canonical SPDI:: NC_000010.11:12725245:T:C
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.12725246T>C, NC_000010.10:g.12767245T>C

Select item 147031228119.

rs1470312281 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:12725093 (GRCh38)
10:12767092 (GRCh37)
Canonical SPDI:: NC_000010.11:12725092:G:A
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.12725093G>A, NC_000010.10:g.12767092G>A

Select item 147015669720.

rs1470156697 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:12726717 (GRCh38)
10:12768716 (GRCh37)
Canonical SPDI:: NC_000010.11:12726716:T:C
Gene:: CAMK1D (Varview), MIR548Q (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.12726717T>C, NC_000010.10:g.12768716T>C

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