SNP Links for Gene (Select 101927855) - SNP

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Items: 1 to 20 of 1786

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Select item 14909583071.

rs1490958307 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:61366984 (GRCh38)
17:59444345 (GRCh37)
Canonical SPDI:: NC_000017.11:61366983:C:T
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000029/4 (GnomAD)
T=0.000042/11 (TOPMED)
HGVS:: NC_000017.11:g.61366984C>T, NC_000017.10:g.59444345C>T

Select item 14909008542.

rs1490900854 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:61365941 (GRCh38)
17:59443302 (GRCh37)
Canonical SPDI:: NC_000017.11:61365940:A:G
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.61365941A>G, NC_000017.10:g.59443302A>G

Select item 14903089893.

rs1490308989 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:61367651 (GRCh38)
17:59445012 (GRCh37)
Canonical SPDI:: NC_000017.11:61367650:C:T
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.61367651C>T, NC_000017.10:g.59445012C>T, NR_136397.1:n.54G>A

Select item 14901384224.

rs1490138422 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 17:61367409 (GRCh38)
17:59444770 (GRCh37)
Canonical SPDI:: NC_000017.11:61367408:A:C
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.61367409A>C, NC_000017.10:g.59444770A>C

Select item 14900820865.

rs1490082086 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:61366374 (GRCh38)
17:59443735 (GRCh37)
Canonical SPDI:: NC_000017.11:61366373:T:C
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.61366374T>C, NC_000017.10:g.59443735T>C

Select item 14894047626.

rs1489404762 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:61363724 (GRCh38)
17:59441085 (GRCh37)
Canonical SPDI:: NC_000017.11:61363723:T:C
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.61363724T>C, NC_000017.10:g.59441085T>C

Select item 14888701107.

rs1488870110 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:61364179 (GRCh38)
17:59441540 (GRCh37)
Canonical SPDI:: NC_000017.11:61364178:C:T
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000094/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.61364179C>T, NC_000017.10:g.59441540C>T

Select item 14887311568.

rs1488731156 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:61364911 (GRCh38)
17:59442272 (GRCh37)
Canonical SPDI:: NC_000017.11:61364910:G:A
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.61364911G>A, NC_000017.10:g.59442272G>A

Select item 14885439939.

rs1488543993 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:61364086 (GRCh38)
17:59441447 (GRCh37)
Canonical SPDI:: NC_000017.11:61364085:G:A
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000017.11:g.61364086G>A, NC_000017.10:g.59441447G>A

Select item 148823782810.

rs1488237828 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:61369379 (GRCh38)
17:59446740 (GRCh37)
Canonical SPDI:: NC_000017.11:61369378:T:C
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.61369379T>C, NC_000017.10:g.59446740T>C

Select item 148733750711.

rs1487337507 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:61361297 (GRCh38)
17:59438658 (GRCh37)
Canonical SPDI:: NC_000017.11:61361296:C:T
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.61361297C>T, NC_000017.10:g.59438658C>T

Select item 148687866512.

rs1486878665 [Homo sapiens]

Variant type:: DELINS
Alleles:: CCACAGGT>- [Show Flanks]
Chromosome:: 17:61363168 (GRCh38)
17:59440529 (GRCh37)
Canonical SPDI:: NC_000017.11:61363164:GGTCCACAGGT:GGT
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGT=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000026/7 (TOPMED)
HGVS:: NC_000017.11:g.61363168_61363175del, NC_000017.10:g.59440529_59440536del

Select item 148642021913.

rs1486420219 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 17:61366066 (GRCh38)
17:59443427 (GRCh37)
Canonical SPDI:: NC_000017.11:61366065:C:A,NC_000017.11:61366065:C:T
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000017.11:g.61366066C>A, NC_000017.11:g.61366066C>T, NC_000017.10:g.59443427C>A, NC_000017.10:g.59443427C>T

Select item 148614321414.

rs1486143214 [Homo sapiens]

Variant type:: DEL
Alleles:: T>- [Show Flanks]
Chromosome:: 17:61362752 (GRCh38)
17:59440113 (GRCh37)
Canonical SPDI:: NC_000017.11:61362751:T:
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000015/4 (TOPMED)
HGVS:: NC_000017.11:g.61362752del, NC_000017.10:g.59440113del, NR_136397.1:n.233del

Select item 148545252815.

rs1485452528 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:61363877 (GRCh38)
17:59441238 (GRCh37)
Canonical SPDI:: NC_000017.11:61363876:A:G
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.61363877A>G, NC_000017.10:g.59441238A>G

Select item 148524548716.

rs1485245487 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 17:61361942 (GRCh38)
17:59439303 (GRCh37)
Canonical SPDI:: NC_000017.11:61361941:A:C
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000017.11:g.61361942A>C, NC_000017.10:g.59439303A>C

Select item 148513024117.

rs1485130241 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:61369582 (GRCh38)
17:59446943 (GRCh37)
Canonical SPDI:: NC_000017.11:61369581:T:C
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.61369582T>C, NC_000017.10:g.59446943T>C

Select item 148395081918.

rs1483950819 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 17:61366665 (GRCh38)
17:59444026 (GRCh37)
Canonical SPDI:: NC_000017.11:61366664:G:A,NC_000017.11:61366664:G:T
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000017.11:g.61366665G>A, NC_000017.11:g.61366665G>T, NC_000017.10:g.59444026G>A, NC_000017.10:g.59444026G>T

Select item 148371314019.

rs1483713140 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:61364727 (GRCh38)
17:59442088 (GRCh37)
Canonical SPDI:: NC_000017.11:61364726:C:T
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000017.11:g.61364727C>T, NC_000017.10:g.59442088C>T

Select item 148357951920.

rs1483579519 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 17:61367143 (GRCh38)
17:59444504 (GRCh37)
Canonical SPDI:: NC_000017.11:61367142:A:C,NC_000017.11:61367142:A:G
Gene:: BCAS3 (Varview), LOC101927855 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000017.11:g.61367143A>C, NC_000017.11:g.61367143A>G, NC_000017.10:g.59444504A>C, NC_000017.10:g.59444504A>G

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