Links from Gene
Items: 1 to 20 of 19115
1.
rs1491495487 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 17:73758741
(GRCh38)
17:71754881
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73758741::G
- Gene:
- LINC00469 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.00034/4
(
ALFA)
G=0.00174/29
(TOMMO)
G=0.01132/588
(GnomAD)
- HGVS:
2.
rs1491475130 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->AG
[Show Flanks]
- Chromosome:
- 17:73798704
(GRCh38)
17:71794844
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73798704:G:GAG
- Gene:
- LINC00469 (Varview), LINC02092 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GAG=0./0
(
ALFA)
GA=0.00024/11
(GnomAD)
- HGVS:
3.
rs1491443264 has merged into rs1159814800 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AGAG>-,AG
[Show Flanks]
- Chromosome:
- 17:73799116
(GRCh38)
17:71795255
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73799108:GAGAGAGAGAG:GAGAGAG,NC_000017.11:73799108:GAGAGAGAGAG:GAGAGAGAG
- Gene:
- LINC00469 (Varview), LINC02092 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GAGAGAGAG=0./0
(
ALFA)
-=0.000011/3
(TOPMED)
-=0.000014/2
(GnomAD)
- HGVS:
4.
rs1491435753 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->A
[Show Flanks]
- Chromosome:
- 17:73799109
(GRCh38)
17:71795249
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73799109:A:AA
- Gene:
- LINC00469 (Varview), LINC02092 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
AA=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
- HGVS:
5.
rs1491391929 has merged into rs71286198 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GTGTGTGTGTGT>-,GTGT,GTGTGT,GTGTGTGT,GTGTGTGTGT,GTGTGTGTGTGTGT,GTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGT
[Show Flanks]
- Chromosome:
- 17:73771261
(GRCh38)
17:71767400
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73771250:GTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGT,NC_000017.11:73771250:GTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGT,NC_000017.11:73771250:GTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGT,NC_000017.11:73771250:GTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGT,NC_000017.11:73771250:GTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGT,NC_000017.11:73771250:GTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGT,NC_000017.11:73771250:GTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000017.11:73771250:GTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000017.11:73771250:GTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000017.11:73771250:GTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
- Gene:
- LINC00469 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GTGTGTGTGTGTGT=0./0
(
ALFA)
GT=0.001638/3
(Korea1K)
GT=0.001984/33
(TOMMO)
GTGTGT=0.028777/7617
(TOPMED)
GTGT=0.071885/360
(1000Genomes)
- HGVS:
NC_000017.11:g.73771251GT[5], NC_000017.11:g.73771251GT[7], NC_000017.11:g.73771251GT[8], NC_000017.11:g.73771251GT[9], NC_000017.11:g.73771251GT[10], NC_000017.11:g.73771251GT[12], NC_000017.11:g.73771251GT[13], NC_000017.11:g.73771251GT[14], NC_000017.11:g.73771251GT[15], NC_000017.11:g.73771251GT[16], NC_000017.10:g.71767390GT[5], NC_000017.10:g.71767390GT[7], NC_000017.10:g.71767390GT[8], NC_000017.10:g.71767390GT[9], NC_000017.10:g.71767390GT[10], NC_000017.10:g.71767390GT[12], NC_000017.10:g.71767390GT[13], NC_000017.10:g.71767390GT[14], NC_000017.10:g.71767390GT[15], NC_000017.10:g.71767390GT[16]
6.
rs1491369387 has merged into rs66843042 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAA>-,A,AA,AAA,AAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 17:73796585
(GRCh38)
17:71792724
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- LINC00469 (Varview), LINC02092 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAAAAA=0./0
(
ALFA)
-=0.2161/1082
(1000Genomes)
- HGVS:
NC_000017.11:g.73796585_73796589del, NC_000017.11:g.73796586_73796589del, NC_000017.11:g.73796587_73796589del, NC_000017.11:g.73796588_73796589del, NC_000017.11:g.73796589del, NC_000017.11:g.73796589dup, NC_000017.11:g.73796588_73796589dup, NC_000017.11:g.73796587_73796589dup, NC_000017.11:g.73796586_73796589dup, NC_000017.11:g.73796585_73796589dup, NC_000017.11:g.73796581_73796589dup, NC_000017.10:g.71792724_71792728del, NC_000017.10:g.71792725_71792728del, NC_000017.10:g.71792726_71792728del, NC_000017.10:g.71792727_71792728del, NC_000017.10:g.71792728del, NC_000017.10:g.71792728dup, NC_000017.10:g.71792727_71792728dup, NC_000017.10:g.71792726_71792728dup, NC_000017.10:g.71792725_71792728dup, NC_000017.10:g.71792724_71792728dup, NC_000017.10:g.71792720_71792728dup
7.
rs1491296330 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->A,C,T,TC
[Show Flanks]
- Chromosome:
- 17:73798708
(GRCh38)
17:71794848
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73798708::A,NC_000017.11:73798708::C,NC_000017.11:73798708::T,NC_000017.11:73798708::TC
- Gene:
- LINC00469 (Varview), LINC02092 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
T=0.00004/1
(TOMMO)
T=0.00055/1
(Korea1K)
- HGVS:
8.
rs1491276268 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->CA,CAAA,CAAAA,CAAAAA,CAAAAAA
[Show Flanks]
- Chromosome:
- 17:73754591
(GRCh38)
17:71750731
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73754591::CA,NC_000017.11:73754591::CAAA,NC_000017.11:73754591::CAAAA,NC_000017.11:73754591::CAAAAA,NC_000017.11:73754591::CAAAAAA
- Gene:
- LINC00469 (Varview), LOC100134391 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
10.
rs1491223794 has merged into rs34596992 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GGGGG>-,G,GG,GGG,GGGG,GGGGGG,GGGGGGG,GGGGGGGG,GGGGGGGGG,GGGGGGGGGG
[Show Flanks]
- Chromosome:
- 17:73798712
(GRCh38)
17:71794851
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73798703:GGGGGGGGGGGGG:GGGGGGGG,NC_000017.11:73798703:GGGGGGGGGGGGG:GGGGGGGGG,NC_000017.11:73798703:GGGGGGGGGGGGG:GGGGGGGGGG,NC_000017.11:73798703:GGGGGGGGGGGGG:GGGGGGGGGGG,NC_000017.11:73798703:GGGGGGGGGGGGG:GGGGGGGGGGGG,NC_000017.11:73798703:GGGGGGGGGGGGG:GGGGGGGGGGGGGG,NC_000017.11:73798703:GGGGGGGGGGGGG:GGGGGGGGGGGGGGG,NC_000017.11:73798703:GGGGGGGGGGGGG:GGGGGGGGGGGGGGGG,NC_000017.11:73798703:GGGGGGGGGGGGG:GGGGGGGGGGGGGGGGG,NC_000017.11:73798703:GGGGGGGGGGGGG:GGGGGGGGGGGGGGGGGG
- Gene:
- LINC00469 (Varview), LINC02092 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GGGGGGGGG=0./0
(
ALFA)
-=0.0495/248
(1000Genomes)
-=0.083/320
(ALSPAC)
- HGVS:
NC_000017.11:g.73798712_73798716del, NC_000017.11:g.73798713_73798716del, NC_000017.11:g.73798714_73798716del, NC_000017.11:g.73798715_73798716del, NC_000017.11:g.73798716del, NC_000017.11:g.73798716dup, NC_000017.11:g.73798715_73798716dup, NC_000017.11:g.73798714_73798716dup, NC_000017.11:g.73798713_73798716dup, NC_000017.11:g.73798712_73798716dup, NC_000017.10:g.71794851_71794855del, NC_000017.10:g.71794852_71794855del, NC_000017.10:g.71794853_71794855del, NC_000017.10:g.71794854_71794855del, NC_000017.10:g.71794855del, NC_000017.10:g.71794855dup, NC_000017.10:g.71794854_71794855dup, NC_000017.10:g.71794853_71794855dup, NC_000017.10:g.71794852_71794855dup, NC_000017.10:g.71794851_71794855dup
11.
rs1491174017 has merged into rs200266461 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAA>-,AA,AAA,AAAAA,AAAAAA
[Show Flanks]
- Chromosome:
- 17:73758748
(GRCh38)
17:71754887
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73758740:AAAAAAAAAAA:AAAAAAA,NC_000017.11:73758740:AAAAAAAAAAA:AAAAAAAAA,NC_000017.11:73758740:AAAAAAAAAAA:AAAAAAAAAA,NC_000017.11:73758740:AAAAAAAAAAA:AAAAAAAAAAAA,NC_000017.11:73758740:AAAAAAAAAAA:AAAAAAAAAAAAA
- Gene:
- LINC00469 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAA=0./0
(
ALFA)
-=0.3285/1645
(1000Genomes)
-=0.4078/407
(GoNL)
- HGVS:
13.
rs1491083061 has merged into rs66843042 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAA>-,A,AA,AAA,AAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 17:73796585
(GRCh38)
17:71792724
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73796570:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- LINC00469 (Varview), LINC02092 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAAAAA=0./0
(
ALFA)
-=0.2161/1082
(1000Genomes)
- HGVS:
NC_000017.11:g.73796585_73796589del, NC_000017.11:g.73796586_73796589del, NC_000017.11:g.73796587_73796589del, NC_000017.11:g.73796588_73796589del, NC_000017.11:g.73796589del, NC_000017.11:g.73796589dup, NC_000017.11:g.73796588_73796589dup, NC_000017.11:g.73796587_73796589dup, NC_000017.11:g.73796586_73796589dup, NC_000017.11:g.73796585_73796589dup, NC_000017.11:g.73796581_73796589dup, NC_000017.10:g.71792724_71792728del, NC_000017.10:g.71792725_71792728del, NC_000017.10:g.71792726_71792728del, NC_000017.10:g.71792727_71792728del, NC_000017.10:g.71792728del, NC_000017.10:g.71792728dup, NC_000017.10:g.71792727_71792728dup, NC_000017.10:g.71792726_71792728dup, NC_000017.10:g.71792725_71792728dup, NC_000017.10:g.71792724_71792728dup, NC_000017.10:g.71792720_71792728dup
15.
rs1491059789 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AT>-
[Show Flanks]
- Chromosome:
- 17:73749489
(GRCh38)
17:71745628
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73749488:AT:
- Gene:
- LINC00469 (Varview), LOC100134391 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000008/2
(TOPMED)
-=0.000022/3
(GnomAD)
-=0.000035/1
(TOMMO)
- HGVS:
16.
rs1491047186 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TA>-
[Show Flanks]
- Chromosome:
- 17:73799961
(GRCh38)
17:71796100
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73799959:ATA:A
- Gene:
- LINC00469 (Varview), LINC02092 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.007081/84
(
ALFA)
-=0.006745/701
(GnomAD)
- HGVS:
17.
rs1490999671 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 17:73754007
(GRCh38)
17:71750146
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73754006:T:C
- Gene:
- LINC00469 (Varview), LOC100134391 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
18.
rs1490949673 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 17:73801766
(GRCh38)
17:71797905
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73801765:A:G
- Gene:
- LINC00469 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.000054/1
(
ALFA)
G=0.000049/13
(TOPMED)
G=0.000057/8
(GnomAD)
G=0.000223/1
(Estonian)
- HGVS:
19.
rs1490847723 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>A
[Show Flanks]
- Chromosome:
- 17:73780728
(GRCh38)
17:71776867
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73780727:T:A
- Gene:
- LINC00469 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0.000071/1
(
ALFA)
A=0.000004/1
(TOPMED)
- HGVS:
20.
rs1490808545 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,C
[Show Flanks]
- Chromosome:
- 17:73751917
(GRCh38)
17:71748056
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73751916:G:A,NC_000017.11:73751916:G:C
- Gene:
- LINC00469 (Varview), LOC100134391 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000007/1
(GnomAD)
C=0.000015/4
(TOPMED)
- HGVS: