SNP Links for Gene (Select 390275) - SNP

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Select item 14905306211.

rs1490530621 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:124570800 (GRCh38)
11:124440696 (GRCh37)
Canonical SPDI:: NC_000011.10:124570799:C:G,NC_000011.10:124570799:C:T
Gene:: OR8A1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by cluster
MAF:: T=0.000004/1 (GnomAD_exomes)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.124570800C>G, NC_000011.10:g.124570800C>T, NC_000011.9:g.124440696C>G, NC_000011.9:g.124440696C>T, NM_001005194.2:c.681C>G, NM_001005194.2:c.681C>T, NM_001005194.1:c.732C>G, NM_001005194.1:c.732C>T, NP_001005194.2:p.Ile227Met

Select item 14880261582.

rs1488026158 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:124570890 (GRCh38)
11:124440786 (GRCh37)
Canonical SPDI:: NC_000011.10:124570889:G:A
Gene:: OR8A1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.124570890G>A, NC_000011.9:g.124440786G>A, NM_001005194.2:c.771G>A, NM_001005194.1:c.822G>A, NP_001005194.2:p.Met257Ile

Select item 14845641043.

rs1484564104 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:124569845 (GRCh38)
11:124439741 (GRCh37)
Canonical SPDI:: NC_000011.10:124569844:C:T
Gene:: OR8A1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.124569845C>T, NC_000011.9:g.124439741C>T

Select item 14829236294.

rs1482923629 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:124571217 (GRCh38)
11:124441113 (GRCh37)
Canonical SPDI:: NC_000011.10:124571216:C:T
Gene:: OR8A1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.124571217C>T, NC_000011.9:g.124441113C>T, NM_001005194.2:c.*168C>T

Select item 14813470665.

rs1481347066 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:124568454 (GRCh38)
11:124438350 (GRCh37)
Canonical SPDI:: NC_000011.10:124568453:A:G
Gene:: OR8A1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.124568454A>G, NC_000011.9:g.124438350A>G

Select item 14785782336.

rs1478578233 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:124569511 (GRCh38)
11:124439407 (GRCh37)
Canonical SPDI:: NC_000011.10:124569510:C:G,NC_000011.10:124569510:C:T
Gene:: OR8A1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.124569511C>G, NC_000011.10:g.124569511C>T, NC_000011.9:g.124439407C>G, NC_000011.9:g.124439407C>T

Select item 14776371757.

rs1477637175 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:124570814 (GRCh38)
11:124440710 (GRCh37)
Canonical SPDI:: NC_000011.10:124570813:G:A
Gene:: OR8A1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.124570814G>A, NC_000011.9:g.124440710G>A, NM_001005194.2:c.695G>A, NM_001005194.1:c.746G>A, NP_001005194.2:p.Gly232Glu

Select item 14764561478.

rs1476456147 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:124568099 (GRCh38)
11:124437995 (GRCh37)
Canonical SPDI:: NC_000011.10:124568098:A:G
Gene:: OR8A1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.124568099A>G, NC_000011.9:g.124437995A>G

Select item 14751751149.

rs1475175114 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:124570751 (GRCh38)
11:124440647 (GRCh37)
Canonical SPDI:: NC_000011.10:124570750:T:C
Gene:: OR8A1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.124570751T>C, NC_000011.9:g.124440647T>C, NM_001005194.2:c.632T>C, NM_001005194.1:c.683T>C, NP_001005194.2:p.Leu211Ser

Select item 147359869010.

rs1473598690 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:124571472 (GRCh38)
11:124441368 (GRCh37)
Canonical SPDI:: NC_000011.10:124571471:T:C
Gene:: OR8A1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.124571472T>C, NC_000011.9:g.124441368T>C

Select item 147356178611.

rs1473561786 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:124570859 (GRCh38)
11:124440755 (GRCh37)
Canonical SPDI:: NC_000011.10:124570858:T:C
Gene:: OR8A1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.124570859T>C, NC_000011.9:g.124440755T>C, NM_001005194.2:c.740T>C, NM_001005194.1:c.791T>C, NP_001005194.2:p.Val247Ala

Select item 147330599312.

rs1473305993 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:124569828 (GRCh38)
11:124439724 (GRCh37)
Canonical SPDI:: NC_000011.10:124569827:C:T
Gene:: OR8A1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.124569828C>T, NC_000011.9:g.124439724C>T

Select item 147257248213.

rs1472572482 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:124571351 (GRCh38)
11:124441247 (GRCh37)
Canonical SPDI:: NC_000011.10:124571350:A:G
Gene:: OR8A1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000029/4 (GnomAD)
G=0.00003/8 (TOPMED)
HGVS:: NC_000011.10:g.124571351A>G, NC_000011.9:g.124441247A>G, NM_001005194.2:c.*302A>G

Select item 147076337114.

rs1470763371 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:124570379 (GRCh38)
11:124440275 (GRCh37)
Canonical SPDI:: NC_000011.10:124570378:C:T
Gene:: OR8A1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.124570379C>T, NC_000011.9:g.124440275C>T, NM_001005194.2:c.260C>T, NM_001005194.1:c.311C>T, NP_001005194.2:p.Ser87Leu

Select item 146962839915.

rs1469628399 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:124569141 (GRCh38)
11:124439037 (GRCh37)
Canonical SPDI:: NC_000011.10:124569140:A:T
Gene:: OR8A1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.124569141A>T, NC_000011.9:g.124439037A>T

Select item 146869021816.

rs1468690218 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:124568422 (GRCh38)
11:124438318 (GRCh37)
Canonical SPDI:: NC_000011.10:124568421:A:G
Gene:: OR8A1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000011.10:g.124568422A>G, NC_000011.9:g.124438318A>G

Select item 146752866017.

rs1467528660 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:124569216 (GRCh38)
11:124439112 (GRCh37)
Canonical SPDI:: NC_000011.10:124569215:G:A,NC_000011.10:124569215:G:T
Gene:: OR8A1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
A=0.000156/1 (1000Genomes)
HGVS:: NC_000011.10:g.124569216G>A, NC_000011.10:g.124569216G>T, NC_000011.9:g.124439112G>A, NC_000011.9:g.124439112G>T

Select item 146630909318.

rs1466309093 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:124569979 (GRCh38)
11:124439875 (GRCh37)
Canonical SPDI:: NC_000011.10:124569978:A:G
Gene:: OR8A1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.124569979A>G, NC_000011.9:g.124439875A>G

Select item 146628696719.

rs1466286967 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 11:124569801 (GRCh38)
11:124439697 (GRCh37)
Canonical SPDI:: NC_000011.10:124569800:A:G,NC_000011.10:124569800:A:T
Gene:: OR8A1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000011.10:g.124569801A>G, NC_000011.10:g.124569801A>T, NC_000011.9:g.124439697A>G, NC_000011.9:g.124439697A>T

Select item 146532954520.

rs1465329545 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:124570075 (GRCh38)
11:124439971 (GRCh37)
Canonical SPDI:: NC_000011.10:124570074:T:C
Gene:: OR8A1 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.124570075T>C, NC_000011.9:g.124439971T>C, NM_001005194.2:c.-45T>C, NM_001005194.1:c.7T>C

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