SNP Links for Gene (Select 407014) - SNP

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Links from Gene

Items: 1 to 20 of 988

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Select item 14906957841.

rs1490695784 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 7:100093233 (GRCh38)
7:99690856 (GRCh37)
Canonical SPDI:: NC_000007.14:100093232:CA:
Gene:: MCM7 (Varview), MIR25 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000014/2 (GnomAD)
-=0.000023/6 (TOPMED)
-=0.000546/1 (Korea1K)
-=0.000566/9 (TOMMO)
HGVS:: NC_000007.14:g.100093233_100093234del, NC_000007.13:g.99690856_99690857del, NG_046973.1:g.9274_9275del

Select item 14889663242.

rs1488966324 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 7:100093737 (GRCh38)
7:99691360 (GRCh37)
Canonical SPDI:: NC_000007.14:100093736:C:A
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
HGVS:: NC_000007.14:g.100093737C>A, NC_000007.13:g.99691360C>A, NG_046973.1:g.9778C>A

Select item 14882955783.

rs1488295578 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:100095039 (GRCh38)
7:99692662 (GRCh37)
Canonical SPDI:: NC_000007.14:100095038:C:T
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000007.14:g.100095039C>T, NC_000007.13:g.99692662C>T

Select item 14856326864.

rs1485632686 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 7:100095573 (GRCh38)
7:99693196 (GRCh37)
Canonical SPDI:: NC_000007.14:100095572:A:C
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.00007/1 (ALFA)
HGVS:: NC_000007.14:g.100095573A>C, NC_000007.13:g.99693196A>C

Select item 14853536745.

rs1485353674 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAACTTTAAATTT>- [Show Flanks]
Chromosome:: 7:100094787 (GRCh38)
7:99692410 (GRCh37)
Canonical SPDI:: NC_000007.14:100094783:TTTAAACTTTAAATTT:TTT
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.100094787_100094799del, NC_000007.13:g.99692410_99692422del

Select item 14851385876.

rs1485138587 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:100093955 (GRCh38)
7:99691578 (GRCh37)
Canonical SPDI:: NC_000007.14:100093954:G:A
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.100093955G>A, NC_000007.13:g.99691578G>A, NG_046973.1:g.9996G>A

Select item 14839988307.

rs1483998830 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 7:100095223 (GRCh38)
7:99692846 (GRCh37)
Canonical SPDI:: NC_000007.14:100095222:T:C
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000007.14:g.100095223T>C, NC_000007.13:g.99692846T>C

Select item 14837167568.

rs1483716756 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 7:100094460 (GRCh38)
7:99692083 (GRCh37)
Canonical SPDI:: NC_000007.14:100094459:A:C
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.100094460A>C, NC_000007.13:g.99692083A>C

Select item 14831564979.

rs1483156497 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 7:100095004 (GRCh38)
7:99692627 (GRCh37)
Canonical SPDI:: NC_000007.14:100095003:A:T
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.100095004A>T, NC_000007.13:g.99692627A>T

Select item 148055410010.

rs1480554100 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:100093876 (GRCh38)
7:99691499 (GRCh37)
Canonical SPDI:: NC_000007.14:100093875:A:G
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.100093876A>G, NC_000007.13:g.99691499A>G, NG_046973.1:g.9917A>G

Select item 147831179111.

rs1478311791 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:100095285 (GRCh38)
7:99692908 (GRCh37)
Canonical SPDI:: NC_000007.14:100095284:G:A
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.100095285G>A, NC_000007.13:g.99692908G>A

Select item 147812641512.

rs1478126415 [Homo sapiens]

Variant type:: INS
Alleles:: ->T [Show Flanks]
Chromosome:: 7:100095518 (GRCh38)
7:99693142 (GRCh37)
Canonical SPDI:: NC_000007.14:100095518::T
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.100095518_100095519insT, NC_000007.13:g.99693141_99693142insT

Select item 147600942513.

rs1476009425 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 7:100094344 (GRCh38)
7:99691967 (GRCh37)
Canonical SPDI:: NC_000007.14:100094343:G:A,NC_000007.14:100094343:G:T
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
T=0.000071/1 (TOMMO)
HGVS:: NC_000007.14:g.100094344G>A, NC_000007.14:g.100094344G>T, NC_000007.13:g.99691967G>A, NC_000007.13:g.99691967G>T

Select item 147503149914.

rs1475031499 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 7:100095489 (GRCh38)
7:99693112 (GRCh37)
Canonical SPDI:: NC_000007.14:100095488:A:T
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000007.14:g.100095489A>T, NC_000007.13:g.99693112A>T

Select item 147488314515.

rs1474883145 [Homo sapiens]

Variant type:: DELINS
Alleles:: AG>- [Show Flanks]
Chromosome:: 7:100095158 (GRCh38)
7:99692781 (GRCh37)
Canonical SPDI:: NC_000007.14:100095155:AGAG:AG
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGAG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.100095156AG[1], NC_000007.13:g.99692779AG[1]

Select item 147377455716.

rs1473774557 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:100093151 (GRCh38)
7:99690774 (GRCh37)
Canonical SPDI:: NC_000007.14:100093150:G:A
Gene:: MCM7 (Varview), MIR25 (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant
HGVS:: NC_000007.14:g.100093151G>A, NC_000007.13:g.99690774G>A, NG_046973.1:g.9192G>A

Select item 147336587617.

rs1473365876 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 7:100094551 (GRCh38)
7:99692174 (GRCh37)
Canonical SPDI:: NC_000007.14:100094550:C:G,NC_000007.14:100094550:C:T
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.100094551C>G, NC_000007.14:g.100094551C>T, NC_000007.13:g.99692174C>G, NC_000007.13:g.99692174C>T

Select item 147274663818.

rs1472746638 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:100093858 (GRCh38)
7:99691481 (GRCh37)
Canonical SPDI:: NC_000007.14:100093857:C:T
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant,upstream_transcript_variant,intron_variant,2KB_upstream_variant
HGVS:: NC_000007.14:g.100093858C>T, NC_000007.13:g.99691481C>T, NG_046973.1:g.9899C>T

Select item 147162500919.

rs1471625009 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 7:100094973 (GRCh38)
7:99692596 (GRCh37)
Canonical SPDI:: NC_000007.14:100094972:C:G
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.100094973C>G, NC_000007.13:g.99692596C>G

Select item 147160515520.

rs1471605155 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 7:100095215 (GRCh38)
7:99692838 (GRCh37)
Canonical SPDI:: NC_000007.14:100095214:C:A,NC_000007.14:100095214:C:G
Gene:: MCM7 (Varview), MIR106B (Varview), MIR25 (Varview), MIR93 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.100095215C>A, NC_000007.14:g.100095215C>G, NC_000007.13:g.99692838C>A, NC_000007.13:g.99692838C>G

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