SNP Links for Gene (Select 445577) - SNP

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Select item 14915035611.

rs1491503561 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 9:93322319 (GRCh38)
9:96084602 (GRCh37)
Canonical SPDI:: NC_000009.12:93322319:C:CC
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
HGVS:: NC_000009.12:g.93322320dup, NC_000009.11:g.96084602dup

Select item 14913414382.

rs1491341438 [Homo sapiens]

Variant type:: DELINS
Alleles:: GC>- [Show Flanks]
Chromosome:: 9:93347618 (GRCh38)
9:96109900 (GRCh37)
Canonical SPDI:: NC_000009.12:93347616:CGC:C
Gene:: C9orf129 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.93347618_93347619del, NC_000009.11:g.96109900_96109901del

Select item 14913264633.

rs1491326463 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TCCCCTGTGACTTGCA [Show Flanks]
Chromosome:: 9:93347617 (GRCh38)
9:96109900 (GRCh37)
Canonical SPDI:: NC_000009.12:93347617:GCATCCCCTGTGACTTGCA:GCATCCCCTGTGACTTGCATCCCCTGTGACTTGCA
Gene:: C9orf129 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GCATCCCCTGTGACTTGCATCCCCTGTGACTTGCA=0./0 (ALFA)
GCATCCCCTGTGACTT=0.000007/1 (GnomAD)
GCATCCCCTGTGACTT=0.000026/7 (TOPMED)
HGVS:: NC_000009.12:g.93347621_93347636dup, NC_000009.11:g.96109903_96109918dup

Select item 14911121604.

rs1491112160 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 9:93322320 (GRCh38)
9:96084602 (GRCh37)
Canonical SPDI:: NC_000009.12:93322318:TCT:T
Validated:: by frequency,by alfa
MAF:: T=0.000084/1 (ALFA)
-=0.000061/8 (GnomAD)
HGVS:: NC_000009.12:g.93322320_93322321del, NC_000009.11:g.96084602_96084603del

Select item 14907736535.

rs1490773653 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 9:93326028 (GRCh38)
9:96088310 (GRCh37)
Canonical SPDI:: NC_000009.12:93326027:C:A
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.93326028C>A, NC_000009.11:g.96088310C>A

Select item 14907259296.

rs1490725929 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 9:93341712 (GRCh38)
9:96103994 (GRCh37)
Canonical SPDI:: NC_000009.12:93341711:C:G
Gene:: C9orf129 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.93341712C>G, NC_000009.11:g.96103994C>G

Select item 14905482967.

rs1490548296 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:93347888 (GRCh38)
9:96110170 (GRCh37)
Canonical SPDI:: NC_000009.12:93347887:T:A
Gene:: C9orf129 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000034/9 (TOPMED)
HGVS:: NC_000009.12:g.93347888T>A, NC_000009.11:g.96110170T>A

Select item 14905227028.

rs1490522702 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:93334334 (GRCh38)
9:96096616 (GRCh37)
Canonical SPDI:: NC_000009.12:93334333:T:C
Gene:: C9orf129 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.93334334T>C, NC_000009.11:g.96096616T>C, NR_166069.1:n.1658A>G, NM_001368813.1:c.*1036A>G

Select item 14904706409.

rs1490470640 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:93335278 (GRCh38)
9:96097560 (GRCh37)
Canonical SPDI:: NC_000009.12:93335277:C:T
Gene:: C9orf129 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.93335278C>T, NC_000009.11:g.96097560C>T, NR_166069.1:n.714G>A, NM_001368813.1:c.*92G>A

Select item 149041760610.

rs1490417606 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:93332614 (GRCh38)
9:96094896 (GRCh37)
Canonical SPDI:: NC_000009.12:93332613:G:A
Gene:: C9orf129 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.93332614G>A, NC_000009.11:g.96094896G>A, NR_166069.1:n.3378C>T, NM_001368813.1:c.*2756C>T

Select item 149026784211.

rs1490267842 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 9:93327520 (GRCh38)
9:96089802 (GRCh37)
Canonical SPDI:: NC_000009.12:93327519:A:C
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.93327520A>C, NC_000009.11:g.96089802A>C

Select item 149025323312.

rs1490253233 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 9:93331568 (GRCh38)
9:96093850 (GRCh37)
Canonical SPDI:: NC_000009.12:93331567:G:C,NC_000009.12:93331567:G:T
Gene:: C9orf129 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000009.12:g.93331568G>C, NC_000009.12:g.93331568G>T, NC_000009.11:g.96093850G>C, NC_000009.11:g.96093850G>T, NR_166069.1:n.4424C>G, NR_166069.1:n.4424C>A, NM_001368813.1:c.*3802C>G, NM_001368813.1:c.*3802C>A

Select item 149021557713.

rs1490215577 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:93328385 (GRCh38)
9:96090667 (GRCh37)
Canonical SPDI:: NC_000009.12:93328384:A:G
Validated:: by frequency,by alfa
MAF:: G=0.00008/1 (ALFA)
HGVS:: NC_000009.12:g.93328385A>G, NC_000009.11:g.96090667A>G

Select item 148999423714.

rs1489994237 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 9:93321748 (GRCh38)
9:96084030 (GRCh37)
Canonical SPDI:: NC_000009.12:93321747:C:A,NC_000009.12:93321747:C:G,NC_000009.12:93321747:C:T
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0./0 (KOREAN)
T=0.000004/1 (TOPMED)
G=0.000071/1 (TOMMO)
HGVS:: NC_000009.12:g.93321748C>A, NC_000009.12:g.93321748C>G, NC_000009.12:g.93321748C>T, NC_000009.11:g.96084030C>A, NC_000009.11:g.96084030C>G, NC_000009.11:g.96084030C>T

Select item 148995567215.

rs1489955672 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:93336722 (GRCh38)
9:96099004 (GRCh37)
Canonical SPDI:: NC_000009.12:93336721:G:A
Gene:: C9orf129 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0./0 (KOREAN)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.93336722G>A, NC_000009.11:g.96099004G>A

Select item 148975696016.

rs1489756960 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 9:93328021 (GRCh38)
9:96090303 (GRCh37)
Canonical SPDI:: NC_000009.12:93328020:A:T
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.93328021A>T, NC_000009.11:g.96090303A>T

Select item 148959738617.

rs1489597386 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 9:93339694 (GRCh38)
9:96101976 (GRCh37)
Canonical SPDI:: NC_000009.12:93339693:G:T
Gene:: C9orf129 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.93339694G>T, NC_000009.11:g.96101976G>T

Select item 148948352318.

rs1489483523 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:93337461 (GRCh38)
9:96099743 (GRCh37)
Canonical SPDI:: NC_000009.12:93337460:A:G
Gene:: C9orf129 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.93337461A>G, NC_000009.11:g.96099743A>G

Select item 148929411519.

rs1489294115 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:93340763 (GRCh38)
9:96103045 (GRCh37)
Canonical SPDI:: NC_000009.12:93340762:A:G
Gene:: C9orf129 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000021/3 (GnomAD)
G=0.000038/10 (TOPMED)
HGVS:: NC_000009.12:g.93340763A>G, NC_000009.11:g.96103045A>G

Select item 148908061620.

rs1489080616 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:93343509 (GRCh38)
9:96105791 (GRCh37)
Canonical SPDI:: NC_000009.12:93343508:T:C
Gene:: C9orf129 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.93343509T>C, NC_000009.11:g.96105791T>C

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