SNP Links for Gene (Select 693234) - SNP

Links from Gene

Items: 1 to 20 of 529

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Select item 14890009141.

rs1489000914 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21035621 (GRCh38)
22:21389910 (GRCh37)
Canonical SPDI:: NC_000022.11:21035620:C:T
Gene:: MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000022.11:g.21035621C>T, NC_000022.10:g.21389910C>T

Select item 14886770452.

rs1488677045 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21036062 (GRCh38)
22:21390351 (GRCh37)
Canonical SPDI:: NC_000022.11:21036061:C:T
Gene:: MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21036062C>T, NC_000022.10:g.21390351C>T

Select item 14857675453.

rs1485767545 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 22:21034697 (GRCh38)
22:21388987 (GRCh37)
Canonical SPDI:: NC_000022.11:21034697:AAAAAAA:AAAAAAAA
Gene:: MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAA=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000036/5 (GnomAD)
HGVS:: NC_000022.11:g.21034704dup, NC_000022.10:g.21388993dup

Select item 14857473044.

rs1485747304 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:21034531 (GRCh38)
22:21388820 (GRCh37)
Canonical SPDI:: NC_000022.11:21034530:G:A
Gene:: SLC7A4 (Varview), MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21034531G>A, NC_000022.10:g.21388820G>A

Select item 14853797735.

rs1485379773 [Homo sapiens]

Variant type:: DELINS
Alleles:: GTGATACA>- [Show Flanks]
Chromosome:: 22:21036185 (GRCh38)
22:21390474 (GRCh37)
Canonical SPDI:: NC_000022.11:21036183:AGTGATACA:A
Gene:: MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000022.11:g.21036185_21036192del, NC_000022.10:g.21390474_21390481del

Select item 14832838446.

rs1483283844 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 22:21035752 (GRCh38)
22:21390041 (GRCh37)
Canonical SPDI:: NC_000022.11:21035751:T:G
Gene:: MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000019/5 (TOPMED)
HGVS:: NC_000022.11:g.21035752T>G, NC_000022.10:g.21390041T>G

Select item 14821664057.

rs1482166405 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 22:21034218 (GRCh38)
22:21388507 (GRCh37)
Canonical SPDI:: NC_000022.11:21034217:T:C
Gene:: SLC7A4 (Varview), MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000029/4 (GnomAD)
HGVS:: NC_000022.11:g.21034218T>C, NC_000022.10:g.21388507T>C, NR_030379.1:n.55A>G

Select item 14802985478.

rs1480298547 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21035871 (GRCh38)
22:21390160 (GRCh37)
Canonical SPDI:: NC_000022.11:21035870:C:T
Gene:: MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000022.11:g.21035871C>T, NC_000022.10:g.21390160C>T

Select item 14800254229.

rs1480025422 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 22:21034716 (GRCh38)
22:21389005 (GRCh37)
Canonical SPDI:: NC_000022.11:21034715:T:A
Gene:: MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000022.11:g.21034716T>A, NC_000022.10:g.21389005T>A

Select item 147862558310.

rs1478625583 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 22:21035723 (GRCh38)
22:21390012 (GRCh37)
Canonical SPDI:: NC_000022.11:21035722:A:G
Gene:: MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000022.11:g.21035723A>G, NC_000022.10:g.21390012A>G

Select item 147681171411.

rs1476811714 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21033864 (GRCh38)
22:21388153 (GRCh37)
Canonical SPDI:: NC_000022.11:21033863:C:T
Gene:: SLC7A4 (Varview), MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21033864C>T, NC_000022.10:g.21388153C>T

Select item 147562842912.

rs1475628429 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 22:21035241 (GRCh38)
22:21389530 (GRCh37)
Canonical SPDI:: NC_000022.11:21035240:C:
Gene:: MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000022.11:g.21035241del, NC_000022.10:g.21389530del

Select item 147476497613.

rs1474764976 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 22:21034171 (GRCh38)
22:21388460 (GRCh37)
Canonical SPDI:: NC_000022.11:21034170:A:C
Gene:: SLC7A4 (Varview), MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000022.11:g.21034171A>C, NC_000022.10:g.21388460A>C

Select item 147475416514.

rs1474754165 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 22:21035318 (GRCh38)
22:21389607 (GRCh37)
Canonical SPDI:: NC_000022.11:21035317:T:G
Gene:: MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000022.11:g.21035318T>G, NC_000022.10:g.21389607T>G

Select item 147428889515.

rs1474288895 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 22:21034286 (GRCh38)
22:21388575 (GRCh37)
Canonical SPDI:: NC_000022.11:21034285:C:A,NC_000022.11:21034285:C:T
Gene:: SLC7A4 (Varview), MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000029/4 (GnomAD)
HGVS:: NC_000022.11:g.21034286C>A, NC_000022.11:g.21034286C>T, NC_000022.10:g.21388575C>A, NC_000022.10:g.21388575C>T

Select item 147200022516.

rs1472000225 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 22:21034164 (GRCh38)
22:21388454 (GRCh37)
Canonical SPDI:: NC_000022.11:21034164:G:GG
Gene:: SLC7A4 (Varview), MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by cluster
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21034165dup, NC_000022.10:g.21388454dup

Select item 146972349217.

rs1469723492 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 22:21033771 (GRCh38)
22:21388060 (GRCh37)
Canonical SPDI:: NC_000022.11:21033770:G:T
Gene:: SLC7A4 (Varview), MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000022.11:g.21033771G>T, NC_000022.10:g.21388060G>T

Select item 146951989118.

rs1469519891 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21035576 (GRCh38)
22:21389865 (GRCh37)
Canonical SPDI:: NC_000022.11:21035575:C:T
Gene:: MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21035576C>T, NC_000022.10:g.21389865C>T

Select item 146926895019.

rs1469268950 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21034377 (GRCh38)
22:21388666 (GRCh37)
Canonical SPDI:: NC_000022.11:21034376:C:T
Gene:: SLC7A4 (Varview), MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000022.11:g.21034377C>T, NC_000022.10:g.21388666C>T

Select item 146340202020.

rs1463402020 has merged into rs1278308922 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>-,AA [Show Flanks]
Chromosome:: 22:21034862 (GRCh38)
22:21389151 (GRCh37)
Canonical SPDI:: NC_000022.11:21034861:AAAAAAAAAA:AAAAAAAAA,NC_000022.11:21034861:AAAAAAAAAA:AAAAAAAAAAA
Gene:: MIR649 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0.000271/5 (ALFA)
-=0.000354/6 (TOMMO)
-=0.001447/383 (TOPMED)
-=0.005459/10 (Korea1K)
HGVS:: NC_000022.11:g.21034871del, NC_000022.11:g.21034871dup, NC_000022.10:g.21389160del, NC_000022.10:g.21389160dup

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