SNP Links for Gene (Select 728405) - SNP

Links from Gene

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Select item 14669843641.

rs1466984364 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 4:9353625 (GRCh38)
4:9355351 (GRCh37)
Canonical SPDI:: NC_000004.12:9353624:C:G,NC_000004.12:9353624:C:T
Gene:: USP17L29 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.3/2 (SGDP_PRJ)
HGVS:: NC_000004.12:g.9353625C>G, NC_000004.12:g.9353625C>T, NC_000004.11:g.9355351C>G, NC_000004.11:g.9355351C>T

Select item 14570599702.

rs1457059970 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:9354186 (GRCh38)
4:9355912 (GRCh37)
Canonical SPDI:: NC_000004.12:9354185:A:G
Gene:: USP17L29 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
HGVS:: NC_000004.12:g.9354186A>G, NC_000004.11:g.9355912A>G, NM_001242332.1:c.549A>G

Select item 14447588023.

rs1444758802 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 4:9353704 (GRCh38)
4:9355430 (GRCh37)
Canonical SPDI:: NC_000004.12:9353703:T:C,NC_000004.12:9353703:T:G
Gene:: USP17L29 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by cluster
MAF:: T=0./0 (SGDP_PRJ)
HGVS:: NC_000004.12:g.9353704T>C, NC_000004.12:g.9353704T>G, NC_000004.11:g.9355430T>C, NC_000004.11:g.9355430T>G, NM_001242332.1:c.67T>C, NM_001242332.1:c.67T>G, NP_001229261.1:p.Ser23Pro, NP_001229261.1:p.Ser23Ala

Select item 14266022734.

rs1426602273 [Homo sapiens]

Variant type:: INS
Alleles:: ->CT [Show Flanks]
Chromosome:: 4:9353596 (GRCh38)
4:9355323 (GRCh37)
Canonical SPDI:: NC_000004.12:9353596::CT
Gene:: USP17L29 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000004.12:g.9353596_9353597insCT, NC_000004.11:g.9355322_9355323insCT

Select item 14150051585.

rs1415005158 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 4:9353602 (GRCh38)
4:9355328 (GRCh37)
Canonical SPDI:: NC_000004.12:9353601:C:G
Gene:: USP17L29 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000004.12:g.9353602C>G, NC_000004.11:g.9355328C>G

Select item 13998385846.

rs1399838584 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 4:9353664 (GRCh38)
4:9355390 (GRCh37)
Canonical SPDI:: NC_000004.12:9353663:A:T
Gene:: USP17L29 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
HGVS:: NC_000004.12:g.9353664A>T, NC_000004.11:g.9355390A>T, NM_001242332.1:c.27A>T, NP_001229261.1:p.Arg9Ser

Select item 13683437597.

rs1368343759 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:9353796 (GRCh38)
4:9355522 (GRCh37)
Canonical SPDI:: NC_000004.12:9353795:T:C
Gene:: USP17L29 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by cluster
MAF:: T=0.1/1 (SGDP_PRJ)
C=0.301/80 (KOREAN)
HGVS:: NC_000004.12:g.9353796T>C, NC_000004.11:g.9355522T>C, NM_001242332.1:c.159T>C

Select item 13572675808.

rs1357267580 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 4:9353623 (GRCh38)
4:9355349 (GRCh37)
Canonical SPDI:: NC_000004.12:9353622:C:A
Gene:: USP17L29 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000004.12:g.9353623C>A, NC_000004.11:g.9355349C>A

Select item 13205184189.

rs1320518418 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 4:9354081 (GRCh38)
4:9355807 (GRCh37)
Canonical SPDI:: NC_000004.12:9354080:A:T
Gene:: USP17L29 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by cluster
MAF:: T=0.27/24 (KOREAN)
A=0.5/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.9354081A>T, NC_000004.11:g.9355807A>T, NM_001242332.1:c.444A>T

Select item 129979361010.

rs1299793610 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 4:9354018 (GRCh38)
4:9355744 (GRCh37)
Canonical SPDI:: NC_000004.12:9354017:T:G
Gene:: USP17L29 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
HGVS:: NC_000004.12:g.9354018T>G, NC_000004.11:g.9355744T>G, NM_001242332.1:c.381T>G

Select item 125776044711.

rs1257760447 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:9354185 (GRCh38)
4:9355911 (GRCh37)
Canonical SPDI:: NC_000004.12:9354184:T:C
Gene:: USP17L29 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by cluster
HGVS:: NC_000004.12:g.9354185T>C, NC_000004.11:g.9355911T>C, NM_001242332.1:c.548T>C, NP_001229261.1:p.Val183Ala

Select item 121919756612.

rs1219197566 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 4:9353833 (GRCh38)
4:9355559 (GRCh37)
Canonical SPDI:: NC_000004.12:9353832:G:T
Gene:: USP17L29 (Varview)
Functional Consequence:: stop_gained,coding_sequence_variant
Validated:: by cluster
HGVS:: NC_000004.12:g.9353833G>T, NC_000004.11:g.9355559G>T, NM_001242332.1:c.196G>T, NP_001229261.1:p.Glu66Ter

Select item 119966976813.

rs1199669768 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:9354120 (GRCh38)
4:9355846 (GRCh37)
Canonical SPDI:: NC_000004.12:9354119:C:T
Gene:: USP17L29 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by cluster
HGVS:: NC_000004.12:g.9354120C>T, NC_000004.11:g.9355846C>T, NM_001242332.1:c.483C>T

Select item 117625665114.

rs1176256651 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 4:9353594 (GRCh38)
4:9355320 (GRCh37)
Canonical SPDI:: NC_000004.12:9353593:T:G
Gene:: USP17L29 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000004.12:g.9353594T>G, NC_000004.11:g.9355320T>G

Select item 117523741715.

rs1175237417 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:9353603 (GRCh38)
4:9355329 (GRCh37)
Canonical SPDI:: NC_000004.12:9353602:A:G
Gene:: USP17L29 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000004.12:g.9353603A>G, NC_000004.11:g.9355329A>G

Select item 87973004016.

rs879730040 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 4:9353292 (GRCh38)
4:9355018 (GRCh37)
Canonical SPDI:: NC_000004.12:9353291:A:T
Gene:: USP17L29 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000004.12:g.9353292A>T, NC_000004.11:g.9355018A>T

Select item 87966064517.

rs879660645 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 4:9353109 (GRCh38)
4:9354835 (GRCh37)
Canonical SPDI:: NC_000004.12:9353108:T:G
Gene:: USP17L29 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by cluster
HGVS:: NC_000004.12:g.9353109T>G, NC_000004.11:g.9354835T>G

Select item 87950798718.

rs879507987 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:9353184 (GRCh38)
4:9354910 (GRCh37)
Canonical SPDI:: NC_000004.12:9353183:A:G
Gene:: USP17L29 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000004.12:g.9353184A>G, NC_000004.11:g.9354910A>G

Select item 87943261519.

rs879432615 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 4:9353212 (GRCh38)
4:9354938 (GRCh37)
Canonical SPDI:: NC_000004.12:9353211:C:A
Gene:: USP17L29 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000004.12:g.9353212C>A, NC_000004.11:g.9354938C>A

Select item 87927898520.

rs879278985 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 4:9353227 (GRCh38)
4:9354953 (GRCh37)
Canonical SPDI:: NC_000004.12:9353226:G:T
Gene:: USP17L29 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000004.12:g.9353227G>T, NC_000004.11:g.9354953G>T

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