SNP Links for Nucleotide (Select 117606318) - SNP

Links from Nucleotide

Items: 1 to 20 of 1087

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Select item 14907781451.

rs1490778145 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 7:76473521 (GRCh38)
7:76102838 (GRCh37)
Canonical SPDI:: NC_000007.14:76473520:G:T
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.00001/1 (GnomAD)
HGVS:: NC_000007.14:g.76473521G>T, NC_000007.13:g.76102838G>T, NR_003262.1:n.1480C>A

Select item 14906878322.

rs1490687832 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 7:76472309 (GRCh38)
7:76101626 (GRCh37)
Canonical SPDI:: NC_000007.14:76472308:G:A,NC_000007.14:76472308:G:T
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00017/2 (ALFA)
G=0./0 (SGDP_PRJ)
A=0.00035/1 (KOREAN)
HGVS:: NC_000007.14:g.76472309G>A, NC_000007.14:g.76472309G>T, NC_000007.13:g.76101626G>A, NC_000007.13:g.76101626G>T, NR_003262.1:n.2692C>T, NR_003262.1:n.2692C>A

Select item 14906060623.

rs1490606062 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 7:76472474 (GRCh38)
7:76101791 (GRCh37)
Canonical SPDI:: NC_000007.14:76472473:A:C
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000015/2 (GnomAD)
C=0.000156/1 (1000Genomes)
C=0.000342/1 (KOREAN)
C=0.001092/2 (Korea1K)
C=0.002194/37 (TOMMO)
HGVS:: NC_000007.14:g.76472474A>C, NC_000007.13:g.76101791A>C, NR_003262.1:n.2527T>G

Select item 14905265594.

rs1490526559 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:76471795 (GRCh38)
7:76101112 (GRCh37)
Canonical SPDI:: NC_000007.14:76471794:G:A
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000007.14:g.76471795G>A, NC_000007.13:g.76101112G>A, NR_003262.1:n.3206C>T

Select item 14902862315.

rs1490286231 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 7:76474501 (GRCh38)
7:76103818 (GRCh37)
Canonical SPDI:: NC_000007.14:76474500:C:G
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.76474501C>G, NC_000007.13:g.76103818C>G, NR_003262.1:n.500G>C

Select item 14895295606.

rs1489529560 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:76470420 (GRCh38)
7:76099737 (GRCh37)
Canonical SPDI:: NC_000007.14:76470419:G:A
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: non_coding_transcript_variant,splice_donor_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.00004/3 (GnomAD)
HGVS:: NC_000007.14:g.76470420G>A, NC_000007.13:g.76099737G>A, NR_003262.1:n.4581C>T

Select item 14894737827.

rs1489473782 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->GT
Chromosome:: no mapping
Canonical SPDI:

Select item 14889333868.

rs1488933386 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:76474004 (GRCh38)
7:76103321 (GRCh37)
Canonical SPDI:: NC_000007.14:76474003:C:T
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000084/1 (ALFA)
T=0.000048/6 (GnomAD)
HGVS:: NC_000007.14:g.76474004C>T, NC_000007.13:g.76103321C>T, NR_003262.1:n.997G>A

Select item 14888500979.

rs1488850097 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: 7:76471149 (GRCh38)
7:76100466 (GRCh37)
Canonical SPDI:: NC_000007.14:76471148:A:C,NC_000007.14:76471148:A:G,NC_000007.14:76471148:A:T
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
T=0.026135/76 (KOREAN)
HGVS:: NC_000007.14:g.76471149A>C, NC_000007.14:g.76471149A>G, NC_000007.14:g.76471149A>T, NC_000007.13:g.76100466A>C, NC_000007.13:g.76100466A>G, NC_000007.13:g.76100466A>T, NR_003262.1:n.3852T>G, NR_003262.1:n.3852T>C, NR_003262.1:n.3852T>A

Select item 148819370010.

rs1488193700 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:76470941 (GRCh38)
7:76100258 (GRCh37)
Canonical SPDI:: NC_000007.14:76470940:C:T
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.00055/9 (ALFA)
HGVS:: NC_000007.14:g.76470941C>T, NC_000007.13:g.76100258C>T, NR_003262.1:n.4060G>A

Select item 148734181711.

rs1487341817 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 7:76470165 (GRCh38)
7:76099482 (GRCh37)
Canonical SPDI:: NC_000007.14:76470164:T:C
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.76470165T>C, NC_000007.13:g.76099482T>C, NR_003262.1:n.4836A>G

Select item 148723259212.

rs1487232592 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 7:76470971 (GRCh38)
7:76100288 (GRCh37)
Canonical SPDI:: NC_000007.14:76470970:A:C
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.76470971A>C, NC_000007.13:g.76100288A>C, NR_003262.1:n.4030T>G

Select item 148718512213.

rs1487185122 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:76471511 (GRCh38)
7:76100828 (GRCh37)
Canonical SPDI:: NC_000007.14:76471510:G:A
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000084/1 (ALFA)
A=0.000014/2 (GnomAD)
G=0.5/1 (SGDP_PRJ)
HGVS:: NC_000007.14:g.76471511G>A, NC_000007.13:g.76100828G>A, NR_003262.1:n.3490C>T

Select item 148695007414.

rs1486950074 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 7:76471928 (GRCh38)
7:76101245 (GRCh37)
Canonical SPDI:: NC_000007.14:76471927:T:C
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000007.14:g.76471928T>C, NC_000007.13:g.76101245T>C, NR_003262.1:n.3073A>G

Select item 148687746015.

rs1486877460 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:76471236 (GRCh38)
7:76100553 (GRCh37)
Canonical SPDI:: NC_000007.14:76471235:A:G
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000007.14:g.76471236A>G, NC_000007.13:g.76100553A>G, NR_003262.1:n.3765T>C

Select item 148312638316.

rs1483126383 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTTTCTTTTCTTTT>- [Show Flanks]
Chromosome:: 7:76474214 (GRCh38)
7:76103531 (GRCh37)
Canonical SPDI:: NC_000007.14:76474210:TTTCTTTCTTTTCTTTT:TTT
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTT=0./0 (ALFA)
-=0.000017/2 (GnomAD)
HGVS:: NC_000007.14:g.76474214_76474227del, NC_000007.13:g.76103531_76103544del, NR_003262.1:n.777_790del

Select item 148268936217.

rs1482689362 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 7:76474202 (GRCh38)
7:76103519 (GRCh37)
Canonical SPDI:: NC_000007.14:76474201:T:C
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
HGVS:: NC_000007.14:g.76474202T>C, NC_000007.13:g.76103519T>C, NR_003262.1:n.799A>G

Select item 148243918218.

rs1482439182 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 7:76474174 (GRCh38)
7:76103491 (GRCh37)
Canonical SPDI:: NC_000007.14:76474173:T:A
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.76474174T>A, NC_000007.13:g.76103491T>A, NR_003262.1:n.827A>T

Select item 148223667719.

rs1482236677 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:76474083 (GRCh38)
7:76103400 (GRCh37)
Canonical SPDI:: NC_000007.14:76474082:G:A
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000029/4 (GnomAD)
HGVS:: NC_000007.14:g.76474083G>A, NC_000007.13:g.76103400G>A, NR_003262.1:n.918C>T

Select item 148214578220.

rs1482145782 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 7:76474543 (GRCh38)
7:76103860 (GRCh37)
Canonical SPDI:: NC_000007.14:76474542:G:T
Gene:: DTX2 (Varview), FDPSP2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.76474543G>T, NC_000007.13:g.76103860G>T, NR_003262.1:n.458C>A

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