SNP Links for Nucleotide (Select 262205361) - SNP

Select item 14377935801.

rs1437793580 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:134170095 (GRCh38)
X:133304125 (GRCh37)
Canonical SPDI:: NC_000023.11:134170094:A:G
Gene:: MIR106A (Varview), MIR19B2 (Varview), MIR92A2 (Varview), MIR363 (Varview), MIR20B (Varview), MIR18B (Varview), LOC124905221 (Varview)
Functional Consequence:: upstream_transcript_variant,downstream_transcript_variant,non_coding_transcript_variant,500B_downstream_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: G=0.000006/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.134170095A>G, NC_000023.10:g.133304125A>G, XR_007068340.1:n.2678T>C, NR_029949.1:n.17T>C

Select item 14352630112.

rs1435263011 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:134170093 (GRCh38)
X:133304123 (GRCh37)
Canonical SPDI:: NC_000023.11:134170092:C:T
Gene:: MIR106A (Varview), MIR19B2 (Varview), MIR92A2 (Varview), MIR363 (Varview), MIR20B (Varview), MIR18B (Varview), LOC124905221 (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,500B_downstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
HGVS:: NC_000023.11:g.134170093C>T, NC_000023.10:g.133304123C>T, XR_007068340.1:n.2680G>A, NR_029949.1:n.19G>A

Select item 13968169953.

rs1396816995 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:134170064 (GRCh38)
X:133304094 (GRCh37)
Canonical SPDI:: NC_000023.11:134170063:G:A
Gene:: MIR106A (Varview), MIR19B2 (Varview), MIR92A2 (Varview), MIR363 (Varview), MIR20B (Varview), MIR18B (Varview), LOC124905221 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,downstream_transcript_variant,500B_downstream_variant,2KB_upstream_variant
Validated:: by frequency,by cluster
MAF:: A=0.000005/1 (GnomAD_exomes)
A=0.000045/1 (TOMMO)
HGVS:: NC_000023.11:g.134170064G>A, NC_000023.10:g.133304094G>A, XR_007068340.1:n.2709C>T, NR_029949.1:n.48C>T

Select item 13779044754.

rs1377904475 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:134170100 (GRCh38)
X:133304130 (GRCh37)
Canonical SPDI:: NC_000023.11:134170099:C:T
Gene:: MIR106A (Varview), MIR19B2 (Varview), MIR92A2 (Varview), MIR363 (Varview), MIR20B (Varview), MIR18B (Varview), LOC124905221 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,downstream_transcript_variant,500B_downstream_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000006/1 (GnomAD_exomes)
T=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.134170100C>T, NC_000023.10:g.133304130C>T, XR_007068340.1:n.2673G>A, NR_029949.1:n.12G>A

Select item 13205161305.

rs1320516130 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:134170075 (GRCh38)
X:133304105 (GRCh37)
Canonical SPDI:: NC_000023.11:134170074:G:A
Gene:: MIR106A (Varview), MIR19B2 (Varview), MIR92A2 (Varview), MIR363 (Varview), MIR20B (Varview), MIR18B (Varview), LOC124905221 (Varview)
Functional Consequence:: upstream_transcript_variant,downstream_transcript_variant,non_coding_transcript_variant,500B_downstream_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: A=0.000011/2 (GnomAD_exomes)
HGVS:: NC_000023.11:g.134170075G>A, NC_000023.10:g.133304105G>A, XR_007068340.1:n.2698C>T, NR_029949.1:n.37C>T

Select item 12828013526.

rs1282801352 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:134170096 (GRCh38)
X:133304126 (GRCh37)
Canonical SPDI:: NC_000023.11:134170095:G:C
Gene:: MIR106A (Varview), MIR19B2 (Varview), MIR92A2 (Varview), MIR363 (Varview), MIR20B (Varview), MIR18B (Varview), LOC124905221 (Varview)
Functional Consequence:: downstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant,500B_downstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: C=0.000006/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.134170096G>C, NC_000023.10:g.133304126G>C, XR_007068340.1:n.2677C>G, NR_029949.1:n.16C>G

Select item 12266595347.

rs1226659534 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:134170059 (GRCh38)
X:133304089 (GRCh37)
Canonical SPDI:: NC_000023.11:134170058:G:A
Gene:: MIR106A (Varview), MIR19B2 (Varview), MIR92A2 (Varview), MIR363 (Varview), MIR20B (Varview), MIR18B (Varview), LOC124905221 (Varview)
Functional Consequence:: downstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant,500B_downstream_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
HGVS:: NC_000023.11:g.134170059G>A, NC_000023.10:g.133304089G>A, XR_007068340.1:n.2714C>T, NR_029949.1:n.53C>T

Select item 11655249508.

rs1165524950 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: X:134170053 (GRCh38)
X:133304083 (GRCh37)
Canonical SPDI:: NC_000023.11:134170052:C:A
Gene:: MIR106A (Varview), MIR19B2 (Varview), MIR92A2 (Varview), MIR363 (Varview), MIR20B (Varview), MIR18B (Varview), LOC124905221 (Varview)
Functional Consequence:: downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,500B_downstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000005/1 (GnomAD_exomes)
A=0.000008/2 (TOPMED)
A=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.134170053C>A, NC_000023.10:g.133304083C>A, XR_007068340.1:n.2720G>T, NR_029949.1:n.59G>T

Select item 8659852939.

rs865985293 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:134170051 (GRCh38)
X:133304081 (GRCh37)
Canonical SPDI:: NC_000023.11:134170050:G:A
Gene:: MIR106A (Varview), MIR19B2 (Varview), MIR92A2 (Varview), MIR363 (Varview), MIR20B (Varview), MIR18B (Varview), LOC124905221 (Varview)
Functional Consequence:: downstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant,500B_downstream_variant,2KB_upstream_variant
HGVS:: NC_000023.11:g.134170051G>A, NC_000023.10:g.133304081G>A, XR_007068340.1:n.2722C>T, NR_029949.1:n.61C>T

Select item 76626330310.

rs766263303 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:134170048 (GRCh38)
X:133304078 (GRCh37)
Canonical SPDI:: NC_000023.11:134170047:A:G
Gene:: MIR106A (Varview), MIR19B2 (Varview), MIR92A2 (Varview), MIR363 (Varview), MIR20B (Varview), MIR18B (Varview), LOC124905221 (Varview)
Functional Consequence:: 500B_downstream_variant,2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.000005/1 (GnomAD_exomes)
G=0.000012/1 (ExAC)
HGVS:: NC_000023.11:g.134170048A>G, NC_000023.10:g.133304078A>G, XR_007068340.1:n.2725T>C, NR_029949.1:n.64T>C

Select item 75365536111.

rs753655361 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:134170065 (GRCh38)
X:133304095 (GRCh37)
Canonical SPDI:: NC_000023.11:134170064:T:C
Gene:: MIR106A (Varview), MIR19B2 (Varview), MIR92A2 (Varview), MIR363 (Varview), MIR20B (Varview), MIR18B (Varview), LOC124905221 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000174/4 (ALFA)
C=0.00001/1 (GnomAD)
C=0.000022/4 (GnomAD_exomes)
C=0.000023/2 (ExAC)
C=0.000023/6 (TOPMED)
HGVS:: NC_000023.11:g.134170065T>C, NC_000023.10:g.133304095T>C, XR_007068340.1:n.2708A>G, NR_029949.1:n.47A>G

Select item 75314426612.

rs753144266 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:134170077 (GRCh38)
X:133304107 (GRCh37)
Canonical SPDI:: NC_000023.11:134170076:T:C
Gene:: MIR106A (Varview), MIR19B2 (Varview), MIR92A2 (Varview), MIR363 (Varview), MIR20B (Varview), MIR18B (Varview), LOC124905221 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0./0 (TWINSUK)
C=0.000005/1 (GnomAD_exomes)
C=0.000012/1 (ExAC)
C=0.000019/5 (TOPMED)
C=0.000346/1 (ALSPAC)
HGVS:: NC_000023.11:g.134170077T>C, NC_000023.10:g.133304107T>C, XR_007068340.1:n.2696A>G, NR_029949.1:n.35A>G

Select item 37568682413.

rs375686824 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:134170050 (GRCh38)
X:133304080 (GRCh37)
Canonical SPDI:: NC_000023.11:134170049:G:A
Gene:: MIR106A (Varview), MIR19B2 (Varview), MIR92A2 (Varview), MIR363 (Varview), MIR20B (Varview), MIR18B (Varview), LOC124905221 (Varview)
Functional Consequence:: downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000123/1 (GoESP)
HGVS:: NC_000023.11:g.134170050G>A, NC_000023.10:g.133304080G>A, XR_007068340.1:n.2723C>T, NR_029949.1:n.62C>T

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