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SRX4473022: Whole genome sequencing of Aotus nancymaae blood sample 39112
1 ILLUMINA (HiSeq X Ten) run: 441.5M spots, 132.4G bases, 32.2Gb downloads

Design: Whole genome sequencing of Aotus nancymaae blood sample 39112
Submitted by: Baylor College of Medicine (BCM)
Study: Owl monkey pedigree sequencing for variant and de novo mutation identification
show Abstracthide Abstract
Whole genome sequencing (~30X coverage) was performed on 30 Aotus nancymaae (owl monkey or Ma''s night monkey) individuals from 6 pedigrees using the Illumina HiSeq platform at the Human Genome Sequencing Center, Baylor College of Medicine (BCM-HGSC). Variants were called within these samples by comparison to the reference assembly of Aotus nancymaae. The pedigree information was used to identify de novo mutations within the samples and mutation rates per generation for this species.
Sample: Sample for Aotus nancymaae 39112
SAMN08978242 • SRS3598411 • All experiments • All runs
Organism: Aotus nancymaae
Library:
Name: OWLGEN.39112-1_1AMP
Instrument: HiSeq X Ten
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
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Pipeline: show...hide...
NameStepPrev StepProgramVersion
Base Caller1NILCasava1.8.3
Quality Scores21Casava1.8.3
Runs: 1 run, 441.5M spots, 132.4G bases, 32.2Gb
Run# of Spots# of BasesSizePublished
SRR7608125441,461,322132.4G32.2Gb2018-07-29

ID:
6058913

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