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Report for CCDS12728.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12728.1 Public Homo sapiens 19 DBP 24 110 108 CCDS HistoryNCBI Gene:1628Re-query CCDS DB by CCDS ID:12728.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12728.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000222122.10 ENSP00000222122.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000222122.10Link to Ensembl Protein Viewer:ENSP00000222122.4Re-query CCDS DB by Nucleotide ID:ENST00000222122Re-query CCDS DB by Protein ID:ENSP00000222122
Original member Current member NCBI NM_001352.5 NP_001343.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001352.5Link to Protein Sequence:NP_001343.2Re-query CCDS DB by Nucleotide ID:NM_001352Re-query CCDS DB by Protein ID:NP_001343Link to BLAST:NP_001343.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001343.2 325 Q10586 325 100% 0 0

Chromosomal Locations for CCDS 12728.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 48630837 48631052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48633444 48633655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48635580 48635990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48636856 48636994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGGCGCGGCCTGTGAGCGACAGGACCCCGGCCCCTCTGCTGCTGGGCGGCCCGGCCGGGACACCCCCTG
GCGGGGGAGCGCTGCTTGGGTTGCGGAGCCTTCTGCAGGGGACCAGCAAGCCCAAAGAGCCGGCCAGCTG
TCTCCTGAAGGAAAAGGAGCGCAAGGCGGCCCTGCCTGCAGCCACAACCCCTGGGCCAGGCCTGGAGACT
GCGGGCCCGGCGGATGCCCCGGCTGGGGCAGTGGTGGGCGGAGGGTCCCCGCGGGGGCGCCCGGGGCCGG
TGCCCGCCCCGGGTCTGTTGGCGCCACTGCTGTGGGAGCGCACGCTGCCGTTCGGCGATGTGGAGTACGT
AGACCTGGACGCCTTCCTGCTGGAGCACGGGCTCCCGCCCAGCCCGCCGCCCCCCGGTGGCCCGTCGCCG
GAGCCGTCGCCCGCGCGGACGCCCGCACCCTCCCCAGGGCCGGGTTCGTGCGGCTCGGCTTCCCCCCGCT
CCTCTCCTGGGCACGCCCCCGCCCGGGCTGCCCTCGGGACCGCCAGCGGCCACCGCGCAGGCCTGACCTC
TCGGGACACACCCAGCCCTGTGGACCCAGACACCGTGGAGGTGTTGATGACCTTTGAACCCGACCCAGCT
GATCTTGCCCTATCAAGCATTCCTGGCCACGAGACCTTTGACCCTCGAAGACATCGCTTCTCAGAAGAGG
AACTTAAGCCCCAGCCAATCATGAAGAAGGCAAGAAAAATCCAGGTGCCGGAGGAGCAGAAGGATGAGAA
ATACTGGAGCCGGCGGTACAAGAACAACGAGGCAGCCAAGCGGTCCCGTGACGCCCGGCGGCTCAAGGAG
AACCAGATATCGGTGCGGGCGGCCTTCCTGGAGAAGGAGAACGCCCTGCTGCGGCAGGAAGTTGTGGCCG
TGCGCCAGGAGCTGTCCCACTACCGCGCCGTGCTGTCCCGATACCAGGCCCAGCACGGGGCCCTGTGA

Translation (325 aa):
MARPVSDRTPAPLLLGGPAGTPPGGGALLGLRSLLQGTSKPKEPASCLLKEKERKAALPAATTPGPGLET
AGPADAPAGAVVGGGSPRGRPGPVPAPGLLAPLLWERTLPFGDVEYVDLDAFLLEHGLPPSPPPPGGPSP
EPSPARTPAPSPGPGSCGSASPRSSPGHAPARAALGTASGHRAGLTSRDTPSPVDPDTVEVLMTFEPDPA
DLALSSIPGHETFDPRRHRFSEEELKPQPIMKKARKIQVPEEQKDEKYWSRRYKNNEAAKRSRDARRLKE
NQISVRAAFLEKENALLRQEVVAVRQELSHYRAVLSRYQAQHGAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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