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Report for CCDS28803.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28803.1 Public Mus musculus 17 Enpp4 23 108 98 CCDS HistoryNCBI Gene:224794Re-query CCDS DB by CCDS ID:28803.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28803.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000024757.13 ENSMUSP00000024757.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000024757.13Link to Ensembl Protein Viewer:ENSMUSP00000024757.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000024757Re-query CCDS DB by Protein ID:ENSMUSP00000024757
Original member Current member EBI ENSMUST00000143137.1 ENSMUSP00000114429.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000143137.1Link to Ensembl Protein Viewer:ENSMUSP00000114429.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000143137Re-query CCDS DB by Protein ID:ENSMUSP00000114429
Original member NCBI NM_001357996.1 NP_001344925.1 Updated not alive Link to Nucleotide Sequence:NM_001357996.1Link to Protein Sequence:NP_001344925.1Re-query CCDS DB by Nucleotide ID:NM_001357996Re-query CCDS DB by Protein ID:NP_001344925
Current member NCBI NM_001357996.2 NP_001344925.1 Accepted alive Link to Nucleotide Sequence:NM_001357996.2Link to Protein Sequence:NP_001344925.1Re-query CCDS DB by Nucleotide ID:NM_001357996Re-query CCDS DB by Protein ID:NP_001344925Link to BLAST:NP_001344925.1
Original member NCBI NM_001357997.1 NP_001344926.1 Updated not alive Link to Nucleotide Sequence:NM_001357997.1Link to Protein Sequence:NP_001344926.1Re-query CCDS DB by Nucleotide ID:NM_001357997Re-query CCDS DB by Protein ID:NP_001344926
Current member NCBI NM_001357997.2 NP_001344926.1 Accepted alive Link to Nucleotide Sequence:NM_001357997.2Link to Protein Sequence:NP_001344926.1Re-query CCDS DB by Nucleotide ID:NM_001357997Re-query CCDS DB by Protein ID:NP_001344926Link to BLAST:NP_001344926.1
Original member NCBI NM_199016.2 NP_950181.2 Updated not alive Link to Nucleotide Sequence:NM_199016.2Link to Protein Sequence:NP_950181.2Re-query CCDS DB by Nucleotide ID:NM_199016Re-query CCDS DB by Protein ID:NP_950181
Current member NCBI NM_199016.3 NP_950181.2 Accepted alive Link to Nucleotide Sequence:NM_199016.3Link to Protein Sequence:NP_950181.2Re-query CCDS DB by Nucleotide ID:NM_199016Re-query CCDS DB by Protein ID:NP_950181Link to BLAST:NP_950181.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001344925.1 456 Q8BTJ4-1 456 100% 0 0
NP_001344926.1 456 Q8BTJ4-1 456 100% 0 0
NP_950181.2 456 Q8BTJ4-1 456 100% 0 0

Chromosomal Locations for CCDS 28803.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 44099313 44099677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44101311 44101481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44101807 44102641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1371 nt):
ATGTTCAATATGAAGATATTAGTAATTCCTTTGTTTTGGGGACTTGTCACTGGCTATAAAGGGAACTCTT
CC
GATAGCTCAGCACCTCGGTTACTTCTGGTATCCTTTGACGGCTTTAGAGCTGACTACCTGAAGAGCTA
T
GACCTTCCTCACCTCCAGAACTTTATCAAAGAAGGTGTCTTGGTGGAACATGTTAAAAATGTTTTTATC
ACC
AAAACTTTTCCAAACCACTACAGCATTGTGACGGGCTTATATGAGGAAAGCCATGGCATCGTGGCCA
AC
TCCATGTATGACAGTGTCACAAAGAAACATTTTTCTGAATCCAATGATAAGGATCCGTTTTGGTGGAA
T
GGAGCGGAGCCTATTTGGGTGACCAATCAGCTTCAGGAAAACAGGTCAAGCGCTGCCGCTATGTGGCCT
GGC
ACTGATGTGCCCATTCACAATATCACAGCTTCCTATTTTATGAACTATAGCAGCTCCGTGTCCTTTA
AG
GAAAGACTGGGTAACGTTACCACATGGCTCAGCAGTTCCAACCCACCAGTCACCTTTGCAGCGCTCTA
T
TGGGAAGAACCAGATGTAAGCGGCCACAAGTATGGGCCTGAAGATAAAGAAAACATGCGCCGGGTATTG
AAA
GAAGTAGATGACCTTATTGGTGATATTGTCCTAAAGCTCAAGGTGTTAGGACTATGGGACAGCCTTA
AT
GTGATCATTACAAGCGATCATGGGATGGCTCAGTGTTCTAAGAACAGACTGATAGATTTGGATTCCTG
C
ATCGACCGTTCAAACTACAGTGTTATAGACTTGACCCCTGTGGCTGCGATTCTTCCCAAAATAAATGTA
ACA
GAGGTTTATGACAAACTGAAACGCTGTAACCCTCACATGAATGTTTATCTCAAAGAAGCTATCCCTA
AC
AGATTTTACTACCAACACAGCAGTCGAATTCAGCCCATTATTTTGGTTGCTGAGGAAGGCTGGACAAT
C
ACCCTGAACAAGTCATCATTTAAATTAGGTGACCATGGCTATGATAATTCCCTGCCTAGTATGCACCCG
TTT
CTTGCTGCCCACGGACCTGCCTTTAGAAAAGGTTACAGGCAGAGCACCATCAACACTGTGGATATTT
AT
CCAATGATGTGCCACATCCTGGGACTAAAACCACATCCCAATAATGGAACCCTCAGTCATACCAAGTG
C
TTGTTGGTGGACCAGTGGTGCATTAATCTCCCAGAAGCCATTGGAATTGTTGTTAGTGCACTATTGGTA
TTA
ACCATGCTAACAGGCCTCATGATATTCATGCGGAGCAGAGCATCCACATCCCGTCCATTCTCCCGTC
TT
CAGCTGCAGGAAGATGACGATGACCCTTTAATTGATTAA


Translation (456 aa):
MFNMKILVIPLFWGLVTGYKGNSSDSSAPRLLLVSFDGFRADYLKSYDLPHLQNFIKEGVLVEHVKNVFI
T
KTFPNHYSIVTGLYEESHGIVANSMYDSVTKKHFSESNDKDPFWWNGAEPIWVTNQLQENRSSAAAMWP
G
TDVPIHNITASYFMNYSSSVSFKERLGNVTTWLSSSNPPVTFAALYWEEPDVSGHKYGPEDKENMRRVL
K
EVDDLIGDIVLKLKVLGLWDSLNVIITSDHGMAQCSKNRLIDLDSCIDRSNYSVIDLTPVAAILPKI
NV
T
EVYDKLKRCNPHMNVYLKEAIPNRFYYQHSSRIQPIILVAEEGWTITLNKSSFK
LGDHGYDNSLPSMHP
F
LAAHGPAFRKGYRQSTINTVDIYPMMCHILGLKPHPNNGTLSHTKCLLVDQWCINLPEAIGIVVSALLV
L
TMLTGLMIFMRSRASTSRPFSRLQLQEDDDDPLID




Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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