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Report for CCDS20771.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20771.1 Public Mus musculus 7 Galp 23 108 98 CCDS HistoryNCBI Gene:232836Re-query CCDS DB by CCDS ID:20771.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20771.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037553.5 ENSMUSP00000037408.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037553.5Link to Ensembl Protein Viewer:ENSMUSP00000037408.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000037553Re-query CCDS DB by Protein ID:ENSMUSP00000037408
Original member Current member NCBI NM_178028.2 NP_821171.1 Accepted alive Link to Nucleotide Sequence:NM_178028.2Link to Protein Sequence:NP_821171.1Re-query CCDS DB by Nucleotide ID:NM_178028Re-query CCDS DB by Protein ID:NP_821171Link to BLAST:NP_821171.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_821171.1 117 Q810H5-1 117 100% 0 0

Chromosomal Locations for CCDS 20771.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 6202801 6202884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6208466 6208514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6211304 6211384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6213837 6213914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6216044 6216105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (354 nt):
ATGGCCTGCTCCGTACATCTGGTCCTCTTCCTCACCATCTTGCTGAGCCTGGCAGAAACACCGGAATCTG
CACCTGCTCACAGGGGACGAGGAGGCTGGACCCTCAATAGTGCTGGTTACCTCCTGGGTCCTGTCCTCCC
CGTTTCCTCCAAGGCCGACCAGGGCAGGAAGAGAGACTCAGCTCTTGAGATCCTAGACCTGTGGAAGATC
ATTGATGGACTTCCTTATTCCCACTCTCCAAGGATGACCAAAAGGACAATGGGAGAAACGTTTGTCAAAG
CGAATACTGGAGATATGCACATACTGGACAAGAATGTTCCCAAGGAAGAAGCCACCCTGGACTCAGAGAG
TTAG

Translation (117 aa):
MACSVHLVLFLTILLSLAETPESAPAHRGRGGWTLNSAGYLLGPVLPVSSKADQGRKRDSALEILDLWKI
IDGLPYSHSPRMTKRTMGETFVKANTGDMHILDKNVPKEEATLDSES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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