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Report for CCDS14128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14128.1 Public Homo sapiens X VCX 24 110 108 CCDS HistoryNCBI Gene:26609Re-query CCDS DB by CCDS ID:14128.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14128.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381059.7 ENSP00000370447.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381059.7Link to Ensembl Protein Viewer:ENSP00000370447.3Re-query CCDS DB by Nucleotide ID:ENST00000381059Re-query CCDS DB by Protein ID:ENSP00000370447
Original member Current member EBI ENST00000688183.1 ENSP00000509688.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000688183.1Link to Ensembl Protein Viewer:ENSP00000509688.1Re-query CCDS DB by Nucleotide ID:ENST00000688183Re-query CCDS DB by Protein ID:ENSP00000509688
Original member Current member NCBI NM_001393662.1 NP_001380591.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001393662.1Link to Protein Sequence:NP_001380591.1Re-query CCDS DB by Nucleotide ID:NM_001393662Re-query CCDS DB by Protein ID:NP_001380591Link to BLAST:NP_001380591.1
Original member Current member NCBI NM_013452.3 NP_038480.2 Accepted alive Link to Nucleotide Sequence:NM_013452.3Link to Protein Sequence:NP_038480.2Re-query CCDS DB by Nucleotide ID:NM_013452Re-query CCDS DB by Protein ID:NP_038480Link to BLAST:NP_038480.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001380591.1 206 Q9H320 206 100% 0 0
NP_038480.2 206 Q9H320 206 100% 0 0

Chromosomal Locations for CCDS 14128.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 7843204 7843305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 7843498 7844016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (621 nt):
ATGAGTCCAAAGCCGAGAGCCTCGGGACCTCCGGCCAAGGCCACGGAGGCAGGAAAGAGGAAGTCCTCCT
CTCAGCCGAGCCCCAGTGACCCGAAGAAGAAGACTACCAAGGTGGCCAAGAAGGGAAAAGCAGTTCGTAG
AGGGAGACGCGGGAAGAAAGGGGCTGCGACAAAGATGGCGGCCGTGACGGCACCTGAGGCGGAGAGCGCG
CCAGCGGCACCCGGCCCCAGCGACCAGCCCAGCCAGGAGCTCCCTCAGCACGAGCTGCCGCCGGAGGAGC
CAGTGAGCGAGGGGACCCAGCACGACCCCCTGAGTCAGGAGGCCGAGCTGGAGGAACCACTGAGTCAGGA
GAGCGAGGTGGAAGAACCACTGAGTCAGGAGAGCCAGGTGGAGGAACCACTGAGTCAGGAGAGCGAGGTG
GAAGAACCACTGAGTCAGGAGAGCCAGGTGGAGGAACCACTGAGTCAGGAGAGCGAGGTGGAGGAACCAC
TGAGTCAGGAGAGCCAGGTGGAGGAACCACTGAGTCAGGAGAGCGAGATGGAAGAACCACTGAGTCAGGA
GAGCCAGGTGGAGGAACCACCGAGTCAGGAGAGCGAGATGGAAGAACTACCGAGTGTGTAG

Translation (206 aa):
MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVTAPEAESA
PAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQEAELEEPLSQESEVEEPLSQESQVEEPLSQESEV
EEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEEPPSQESEMEELPSV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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