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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS1308.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
1308.1 |
Public |
Homo sapiens |
1 |
SLC9C2 |
24 |
110 |
108 |
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Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 1308.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENST00000367714.4 |
ENSP00000356687.3 |
MANE Select |
Accepted |
alive |
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NCBI |
NM_178527.4 |
NP_848622.2 |
MANE Select |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_848622.2 |
1124 |
Q5TAH2 |
1124 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 1308.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3375 nt): ATGAGTTCTTACTTCTGGGCACAAAATGAAAGTAACAGACCTGATTTACTCTGCGGGCAGCCAGCTGACT ACCTTGTTGAAGAGAAACATTTCACAACGCTTGTATGCTTCATTGTTGTTTTGGGAGGGCTTTTGAAGAT GTGTTTAAAGAATTGTGAAGTCATTGTTTTGACGATTCTTTCTCTATCAGGATTCGTGATAGGACACATG GCCTACAATTCTGTTGAGGTGCACCAAATTGTCTACCCTCTTCTAAGAACATCAAGTTTTTCACTTTATT CTTACTTTTCACCTTTAATTATATTTATGGTTGCTTTGGATGTAGAATTTTATACACTCAAGAAAATGTT TTGGCAGGTCTTGTTAACTGGATTAATTAGCTTTTCTACAGCAAGCATCATAATTGGATATGTCGTTATA AAATTCAATAAAGATTCATGGGATTTGCAATCTTGCCTACTCTTTAGCATCACCCTTGGCATTATAGATC CTCTTCGTTCTGTGAATTCACTAAAAACTATTGGCATTTCTAAAATATACATTGATCTCATTAGAGGAGA ATCATTGATCATTTGTAGCATCGCATCAATTTTTTTTGGAAATTTTCGGGGCAACAGAATCCACTTTTCT ATTTTTAGAGATTTACATGTAGGCATTGAACTCAGCTATGACATTTTGGGAAGCATAATATTTGGATATT GGTGTGCAAAAATCATTCAGTGTATATTGGCTGACGTTTTTAGCAATATGCTGACTAATATCATTCTCTG CTTTTCAATGGTGTACATGACTTTCTATATTGTGGAATTTTTAGGAATGTCAGGCACTCTTGCCTTAGCC GCTGTAGGACTGAATTTAGATTCTTTAACTTTTAAACCGAAGATCGAACTTGTAATTACTAAGTTCTTAA GAATTTTTTCATCTGTATATGAACATTTAATATATGCTTTCTTTGGCATTGTGATTGGATGTGGAGAACT CAGCCACTATGAATTTCACACTATACCTTTCATATTCATTTTATTTACAACAGTGAATTTGGTAAGGTTG CTTACTATTTTGTTAGTGAGCCCTATTTTGATGCATTCAAATTATGAATATAATTGGCGATGGGGAGTTG TAATCACGTGGTCTGGAATTAAAGGAGTTTTTAATTTACTCTGGGCTCCTGATGTTTATAATCTCGCTGA ACGAAAAGTGGAAGTACCACAAATGTTTATACTCTATGTACAAGTAATATCATTATTGACAATGGGAATA AATTCATACGTGATGACTCAGTCAGCCAGGAAGTTAGATTTGTGTGTTCTTTCCCTCCCAAGACAAATGA TCTTGCAAAATGCCACTCAGCACATACAGGAGATAGTACAGAACACAATAACTTTATTTAAAACAGAAAA AATTTTGACAAATGTTAACTGGACCTTAGTAGAAGATAAAACGAGGATCGAATACATTCCTTTTTCCCAC GTTTCACATAATGATATGAAGACAGAATCCACAACAGATGAAGCTTTAATGGAGGAAGCCAGATTGCATG TAGCTGCAATACAAATGAGTAGCTTTGAAAAACAGCGTAACAATGGAATTCTTGAAATAGAGGCAGCCCG GATATTAATTGGTGCAGCAAAATGCTATTACTCCATCCAAGGAAAATTCATGAGTATTTATGATGTTTCA ACTTATATGAGAACTAGAAGTTGGCTTATAAAGTTTAAAAATGTTTTAACTTTCTTGGAATATTGTATAG AAAAGATACATTTTATTCCACCTGAGAGTAATACATTTCTGACTTTTATATTTCACATAGTATTTTCTGA AGAATTTGAATATACAGGACAGATTATAAATTTGATATATATTTATCCTATGATAATACATCTGTGGCCA ATGGCAAGAGGTTTAAATGTATCAGCACTGATATCAATAAACTACTATTTTATGTTTTTATATGTATTAG AATCAACATTGAAGATAATAATTTTGAAAAGGAAATATTTTCAACAATGTTGGAATACTTTGGAATTTTT TATCCTGGTTATTGGAATCATTGATATCTTTTGTGTATACTTTGTGAAATTGAGACCAGACAACTTGGCT CTTATACAGCTTACAGTAATAATGGGATATTTAAGAATAATTAGGTTTCTTCCTCTCTTCAAGATAATAG TACCAATACTGATAAGAATTGCAGATGTGCAGATCAAAAAGCGCCTCAGCTTGATGTATAGTATTACAAA AGGCTATATCAAAAGTCAAGAAGATGCCAAACTTCTAATAAAACAAATAGCTGTCTGTGAATCAATATAT CAGAAACTATGTGAAATTTTGGAAACCAACAAACAGGATGCTGTCAAAGAATTAGTACTCATGGAGCATG AGGGTCGTGATGTTGTCATTGCTTTGAAGACTAAACAGGCAATCCGGAATGTGATTGCTAAAGCTCTAAA AAATCTCACCTTCCTTTGTTCAAGAGGCATTATTGATAAGCATGAAGTCATTGAGATAAATAAGGTACTT CTTAAAAAATTAAAAGCACTAAATAACTTTCCAAAGGCAATCCCACCCCCAACTCCTGACATATACCTTC ACAACATCATTTGGCTGGAAGGTAAAGATGTTCTCATTGACTTCTTCAAGGAAAGAGCCAAACTTGCCTG TTTTGACTCTGGAGATACCATTTGTAAAGGAGGTGAAATGCCACAAGGAATCTACTTAATTATTTCAGGA ATGGCAATTTTGCATAGTTTATCTCCTACCTTTGGAATAGAGAGTAATCAAAGGTGTGATAGAGGGTCCA GAGACATGTTTACAGAGTTCTGTACTACTGGGGACATAATTGGAGAGCTAAGCTGTCTGCTTAAGCGTGA AATTGAATATACCGTCATCTGTGAAACTAGTTTACAGGCCTGCTTTATCTCCCTGGAGGATTTATATGAA GGCTTTGATGCCTTCTGGCCATCTCTGGAATATAAAATATGGCTAAAGCTTGCTCTCAGTACTGCCTATC AGTATTTTGAATCAAGTCTTATTGATGAGGACTTAAGGTTTCAGAACTGTGTGATGTTCAATCAAGCATA TGTGGAAACTTTATCAAGCTATAGTGACATGATTATTGATAATATGACCATGAAATTTGTTATCATTGTG TATGGCAGTGTAATTGATACTAAGACAGAGGAACCATATTTTGCACCTTGCATTATACCTACAACCTGTG AGCAGGTTCAGGGAACTTCTGATTTAAGCAAGCTGCTGATAATCCAAGCATCTGAGCTTACCCAAAGAAA TAGTAACACCAATGTCATGGCCTCAGTCAACACGGTCTTTGAACAACCAGGAAAGAATATAAATGGAAGA CAAAAGATGAGTTGA
Translation (1124 aa): MSSYFWAQNESNRPDLLCGQPADYLVEEKHFTTLVCFIVVLGGLLKMCLKNCEVIVLTILSLSGFVIGHM AYNSVEVHQIVYPLLRTSSFSLYSYFSPLIIFMVALDVEFYTLKKMFWQVLLTGLISFSTASIIIGYVVI KFNKDSWDLQSCLLFSITLGIIDPLRSVNSLKTIGISKIYIDLIRGESLIICSIASIFFGNFRGNRIHFS IFRDLHVGIELSYDILGSIIFGYWCAKIIQCILADVFSNMLTNIILCFSMVYMTFYIVEFLGMSGTLALA AVGLNLDSLTFKPKIELVITKFLRIFSSVYEHLIYAFFGIVIGCGELSHYEFHTIPFIFILFTTVNLVRL LTILLVSPILMHSNYEYNWRWGVVITWSGIKGVFNLLWAPDVYNLAERKVEVPQMFILYVQVISLLTMGI NSYVMTQSARKLDLCVLSLPRQMILQNATQHIQEIVQNTITLFKTEKILTNVNWTLVEDKTRIEYIPFSH VSHNDMKTESTTDEALMEEARLHVAAIQMSSFEKQRNNGILEIEAARILIGAAKCYYSIQGKFMSIYDVS TYMRTRSWLIKFKNVLTFLEYCIEKIHFIPPESNTFLTFIFHIVFSEEFEYTGQIINLIYIYPMIIHLWP MARGLNVSALISINYYFMFLYVLESTLKIIILKRKYFQQCWNTLEFFILVIGIIDIFCVYFVKLRPDNLA LIQLTVIMGYLRIIRFLPLFKIIVPILIRIADVQIKKRLSLMYSITKGYIKSQEDAKLLIKQIAVCESIY QKLCEILETNKQDAVKELVLMEHEGRDVVIALKTKQAIRNVIAKALKNLTFLCSRGIIDKHEVIEINKVL LKKLKALNNFPKAIPPPTPDIYLHNIIWLEGKDVLIDFFKERAKLACFDSGDTICKGGEMPQGIYLIISG MAILHSLSPTFGIESNQRCDRGSRDMFTEFCTTGDIIGELSCLLKREIEYTVICETSLQACFISLEDLYE GFDAFWPSLEYKIWLKLALSTAYQYFESSLIDEDLRFQNCVMFNQAYVETLSSYSDMIIDNMTMKFVIIV YGSVIDTKTEEPYFAPCIIPTTCEQVQGTSDLSKLLIIQASELTQRNSNTNVMASVNTVFEQPGKNINGR QKMS
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