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Report for CCDS10716.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10716.1 Public Homo sapiens 16 AHSP 24 110 108 CCDS HistoryNCBI Gene:51327Re-query CCDS DB by CCDS ID:10716.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10716.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302312.9 ENSP00000307199.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302312.9Link to Ensembl Protein Viewer:ENSP00000307199.4Re-query CCDS DB by Nucleotide ID:ENST00000302312Re-query CCDS DB by Protein ID:ENSP00000307199
Original member Current member NCBI NM_001318221.2 NP_001305150.1 Accepted alive Link to Nucleotide Sequence:NM_001318221.2Link to Protein Sequence:NP_001305150.1Re-query CCDS DB by Nucleotide ID:NM_001318221Re-query CCDS DB by Protein ID:NP_001305150Link to BLAST:NP_001305150.1
Original member Current member NCBI NM_001318222.2 NP_001305151.1 Accepted alive Link to Nucleotide Sequence:NM_001318222.2Link to Protein Sequence:NP_001305151.1Re-query CCDS DB by Nucleotide ID:NM_001318222Re-query CCDS DB by Protein ID:NP_001305151Link to BLAST:NP_001305151.1
Original member Current member NCBI NM_016633.4 NP_057717.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016633.4Link to Protein Sequence:NP_057717.1Re-query CCDS DB by Nucleotide ID:NM_016633Re-query CCDS DB by Protein ID:NP_057717Link to BLAST:NP_057717.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305150.1 102 Q9NZD4 102 100% 0 0
NP_001305151.1 102 Q9NZD4 102 100% 0 0
NP_057717.1 102 Q9NZD4 102 100% 0 0

Chromosomal Locations for CCDS 10716.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 31528140 31528214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31528458 31528691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (309 nt):
ATGGCTCTTCTTAAGGCCAATAAGGATCTCATTTCCGCAGGATTGAAGGAGTTCAGCGTTCTGCTGAATC
AGCAGGTCTTCAATGATCCTCTCGTCTCTGAAGAAGACATGGTGACTGTGGTGGAGGACTGGATGAACTT
CTACATCAACTATTACAGGCAGCAGGTGACAGGGGAGCCCCAAGAGCGAGACAAGGCTCTGCAGGAGCTT
CGGCAAGAGCTGAACACTCTGGCCAACCCTTTCCTGGCCAAGTACAGGGACTTCCTGAAGTCTCATGAGC
TCCCGAGTCACCCACCGCCCTCCTCCTAG

Translation (102 aa):
MALLKANKDLISAGLKEFSVLLNQQVFNDPLVSEEDMVTVVEDWMNFYINYYRQQVTGEPQERDKALQEL
RQELNTLANPFLAKYRDFLKSHELPSHPPPSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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