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Report for CCDS83891.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83891.1 Public Mus musculus 11 Lrrc3c 23 108 98 CCDS HistoryNCBI Gene:192852Re-query CCDS DB by CCDS ID:83891.1Re-query CCDS DB by GeneID:192852See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 83891.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000142268.2 ENSMUSP00000147537.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000142268.2Link to Ensembl Protein Viewer:ENSMUSP00000147537.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000142268Re-query CCDS DB by Protein ID:ENSMUSP00000147537
Original member Current member NCBI NM_001195544.1 NP_001182473.1 Accepted alive Link to Nucleotide Sequence:NM_001195544.1Link to Protein Sequence:NP_001182473.1Re-query CCDS DB by Nucleotide ID:NM_001195544Re-query CCDS DB by Protein ID:NP_001182473Link to BLAST:NP_001182473.1

Chromosomal Locations for CCDS 83891.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 98598819 98599586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (768 nt):
ATGCCCCTACTAGCTCCTCGCCTCCTGCCCCTCCTGCTGGTGATTGGCACCGGGGGCTCTGTGCCCCGCC
CCCTGGCACTGCCCCAGGGCTGCTACGTAGCAGAAGAAGCCGGGGAACAGACATTCCGCTGCAGCCGGGC
TGGTCTGAGTGCCGTGCCCAACGGTATCCCCAACGACACCCGAAAGCTTTACCTGGACGCCAACCAGTTG
GCATCAGTGCCAGCTGGTGCCTTCCAGCACCTGCCTGCCCTGGAAGAACTAGACCTGTCTCATAACGCTC
TTGTTCATCTCTCAGGGGCTGCTTTCCAGGGCCTGGAGGGCACTCTGCGCCACCTCGACCTCTCTGCCAA
CCAGCTAGCATCTGTGCCTGTGGCAGCCTTCGTGGGGCTGCAGATCCAAGTGAACCTGTCTGCCAACCCA
TGGCGCTGCGACTGTGCCCTACAGGAAGTGCTCAGGCACGTCAGGTTGGCTCCAGGCTCCGGGACAGGCA
TTGTGTGTGGTCCAGAAGCCCGACCAGATCTCGTGGGACACGAGTTCCTTCTGCTCACCAGGGAGGAAGA
GCTGTGTGGGACAGGACGAGGTGGGACCCGAAGGAGCACGGATGTGGCCCTGTTAGTCACCATGGGGGGC
TGGCTGACACTGGTAGTGGCTTATCTGATCCGCTATGTGTGGCAGAACCGAGATGAGACGCGGCGCCCGG
TCAAGCGGGCTCCTCCCGCGCAGCCTGTGCGCTCAGAGGACTCCTCTACACTCAGCACAGTGCTCTGA

Translation (255 aa):
MPLLAPRLLPLLLVIGTGGSVPRPLALPQGCYVAEEAGEQTFRCSRAGLSAVPNGIPNDTRKLYLDANQL
ASVPAGAFQHLPALEELDLSHNALVHLSGAAFQGLEGTLRHLDLSANQLASVPVAAFVGLQIQVNLSANP
WRCDCALQEVLRHVRLAPGSGTGIVCGPEARPDLVGHEFLLLTREEELCGTGRGGTRRSTDVALLVTMGG
WLTLVVAYLIRYVWQNRDETRRPVKRAPPAQPVRSEDSSTLSTVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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