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Report for CCDS50082.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50082.1 Public Mus musculus 17 Ddah2 23 108 98 CCDS HistoryNCBI Gene:51793Re-query CCDS DB by CCDS ID:50082.1Re-query CCDS DB by GeneID:51793See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50082.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000007255.12 ENSMUSP00000007255.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000007255.12Link to Ensembl Protein Viewer:ENSMUSP00000007255.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000007255Re-query CCDS DB by Protein ID:ENSMUSP00000007255
Original member Current member NCBI NM_001190449.1 NP_001177378.1 Accepted alive Link to Nucleotide Sequence:NM_001190449.1Link to Protein Sequence:NP_001177378.1Re-query CCDS DB by Nucleotide ID:NM_001190449Re-query CCDS DB by Protein ID:NP_001177378Link to BLAST:NP_001177378.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177378.1 285 Q99LD8 285 100% 0 0

Chromosomal Locations for CCDS 50082.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 35060165 35060461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35060603 35060702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35060833 35060906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35061005 35061124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35061476 35061625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35061791 35061907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (858 nt):
ATGGGGACGCCGGGGGAGGGGCTGGGTCGTTGTTCCCATGCCCTGATCCGGGGTGTCCCCGAGAGCTTGG
CATCCGGGGAAGGTGCTGGCGCTGGTCTTCCGGCTCTGGACCTGGCTAAAGCTCAAAGGGAGCATGGAGT
ACTAGGAGGTAAACTGAGGCAACGACTAGGGCTGCAGCTGCTTGAACTGCCTCCTGAGGAGTCACTGCCG
CTGGGACCACTGCTTGGTGACACGGCTGTGATCCAAGGAGACACGGCCCTAATCACAAGGCCCTGGAGCC
CAGCACGTAGGCCTGAGGTTGATGGAGTGCGTAAAGCCCTCCAGGACTTGGGACTCCGAATTGTGGAGAT
GGGGGATGAGAATGCGACGCTGGACGGCACCGACGTCCTCTTCACCGGCCGGGAGTTTTTCGTAGGCCTC
TCCAAGTGGACCAATCATCGAGGAGCTGAGATCGTGGCAGACACGTTCCGGGACTTCGCTGTCTCAACGG
TACCGGTCTCAGGCTCCTCGCACCTGCGCGGCCTCTGTGGCATGGGGGGACCTCGCACCGTGGTGGCTGG
AAGCAGCGAGGCTGCCCAAAAAGCAGTCAGGGCAATGGCAGCGCTGACTGATCACCCCTACGCCTCTCTG
ACCCTCCCAGATGATGCAGCTAGTGACTGTCTCTTTCTGCGTCCTGGGTTGCCTGGTGCCACACCTTTCC
TCCTGCACCGCGGAGGTGGGGACCTGCCCAACAGCCAGGAGGCTCTGCAGAAGCTCTCTGATGTCACCCT
GGTACCTGTGTCCTGCTCAGAACTGGAGAAGGCTGGAGCTGGCCTCAGCTCCCTCTGCCTGGTGCTCAGC
ACACGCCCCCACTGCTGA

Translation (285 aa):
MGTPGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLGLQLLELPPEESLP
LGPLLGDTAVIQGDTALITRPWSPARRPEVDGVRKALQDLGLRIVEMGDENATLDGTDVLFTGREFFVGL
SKWTNHRGAEIVADTFRDFAVSTVPVSGSSHLRGLCGMGGPRTVVAGSSEAAQKAVRAMAALTDHPYASL
TLPDDAASDCLFLRPGLPGATPFLLHRGGGDLPNSQEALQKLSDVTLVPVSCSELEKAGAGLSSLCLVLS
TRPHC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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