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Report for CCDS89154.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89154.1 Public Mus musculus 17 Fez2 23 108 98 CCDS HistoryNCBI Gene:225020Re-query CCDS DB by CCDS ID:89154.1Re-query CCDS DB by GeneID:225020See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89154.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000234029.1 ENSMUSP00000157359.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000234029.1Link to Ensembl Protein Viewer:ENSMUSP00000157359.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000234029Re-query CCDS DB by Protein ID:ENSMUSP00000157359
Original member Current member NCBI NM_001285946.1 NP_001272875.1 Accepted alive Link to Nucleotide Sequence:NM_001285946.1Link to Protein Sequence:NP_001272875.1Re-query CCDS DB by Nucleotide ID:NM_001285946Re-query CCDS DB by Protein ID:NP_001272875Link to BLAST:NP_001272875.1

Chromosomal Locations for CCDS 89154.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 78378398 78378429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78384744 78384819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78400630 78400898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78402740 78402881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78404728 78404844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78412864 78412972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78417833 78418083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (996 nt):
ATGGCGGCTGACGGGGACTGGCAGGATTTCTATGAGTTCCAGGAGCCGGCCGGGAGTGTCCAGGAACAGG
AGAACTGTAACGCGAGCCCGGAGGCTGGCGCGGGGGCACACGCGGGCGGCGACAGCTTCCCGGCGCTGGC
TTCCAGCCTGGAGGAGAAGCTGAGCCTGTGCTTCCGCCCCACGTCGGAGGCCGAGCCCCCACGGGCGGCC
GTGCGGCCCATCACGGAGTGCAGCCTCCTGCAAGGGGACGAGATTTGGAATGCCCTGACAGATAACTATG
GGAATGTCATGCCTGTAGACTGGAAGTCGTCCCATACAAGGACCTTGCATTTGCTTACTCTGAACCTCTC
GGAGAAAGGGATGAACGACGGCTTGCTCTTTGACGCCTCGGATGAGGAGGAGCTGAGGGAGCAGTTGGAC
ATGCATTCGATCATTGTCTCCTGTGTCAACGAAGAGCCTCTCTTCACTGCAGACCAGGTGATTGAAGAAA
TTGAAGAAATGATGCAGGAGTCACCAGACCCAGAAGACGACGAGACCCCCACACAGTCAGACCGGCTCTC
TATGCTCTCCCAGGAGATTCAGACTCTCAAGAGGTCTAGCATGAGCAGCTATGAAGAGCGAGTGAAAAGG
CTGTCGGTGTCTGAGCTAAACGAACTGCTGGAAGAGATCGAGGCAGCCATTAAGCAGTACTCTGAGGAGC
TGGTGCAGCAGCTGGCCCTGCGAGATGAACTCGAGTTCGAGAAGGAAGTGGAAAACAGCTTCATTTCCGC
TCTGATTGAGGTGCAGAACAAGCAGAAAGAACACAAAGAGACAGCCAAGAAGAAGAAGAAGCTCAAAAGT
GGCAGCTCTCAGAACGGGAGGAGTGAGAGAAGTCACATGCCGGGCACATATCTGACGACAGTCATCCCTT
ACGAGAAGAAGAGTGGCCCGCCGTCCGTGGAAGATCTTCAGATACTAACCAAAATGTGGCTGTCAGTTTT
GAATTCCTCCATCTGA

Translation (331 aa):
MAADGDWQDFYEFQEPAGSVQEQENCNASPEAGAGAHAGGDSFPALASSLEEKLSLCFRPTSEAEPPRAA
VRPITECSLLQGDEIWNALTDNYGNVMPVDWKSSHTRTLHLLTLNLSEKGMNDGLLFDASDEEELREQLD
MHSIIVSCVNEEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQEIQTLKRSSMSSYEERVKR
LSVSELNELLEEIEAAIKQYSEELVQQLALRDELEFEKEVENSFISALIEVQNKQKEHKETAKKKKKLKS
GSSQNGRSERSHMPGTYLTTVIPYEKKSGPPSVEDLQILTKMWLSVLNSSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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