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Report for CCDS9558.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9558.1 Public Homo sapiens 14 RNASE6 24 110 108 CCDS HistoryNCBI Gene:6039Re-query CCDS DB by CCDS ID:9558.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9558.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304677.3 ENSP00000302046.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304677.3Link to Ensembl Protein Viewer:ENSP00000302046.2Re-query CCDS DB by Nucleotide ID:ENST00000304677Re-query CCDS DB by Protein ID:ENSP00000302046
Original member Current member NCBI NM_005615.5 NP_005606.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005615.5Link to Protein Sequence:NP_005606.1Re-query CCDS DB by Nucleotide ID:NM_005615Re-query CCDS DB by Protein ID:NP_005606Link to BLAST:NP_005606.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005606.1 150 Q93091 150 100% 0 0

Chromosomal Locations for CCDS 9558.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20781700 20782152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (453 nt):
ATGGTGCTATGCTTTCCTCTTCTTTTACTGCTGCTGGTTCTATGGGGACCAGTGTGTCCACTTCATGCTT
GGCCTAAGCGTCTCACCAAGGCTCACTGGTTTGAAATTCAGCATATACAGCCAAGTCCTCTCCAATGCAA
CAGGGCAATGAGTGGCATCAACAATTATACCCAGCACTGTAAGCATCAAAATACCTTTCTGCATGACTCT
TTCCAGAATGTGGCTGCTGTCTGTGATTTGCTCAGCATTGTCTGCAAAAATCGTCGGCACAACTGCCACC
AGAGCTCAAAGCCTGTCAACATGACTGACTGCAGACTCACTTCAGGAAAGTATCCCCAGTGCCGCTATAG
TGCTGCTGCCCAGTACAAATTCTTCATTGTTGCCTGTGACCCCCCTCAGAAGAGCGATCCCCCCTACAAG
TTGGTTCCTGTACACTTAGATAGTATTCTCTAA

Translation (150 aa):
MVLCFPLLLLLLVLWGPVCPLHAWPKRLTKAHWFEIQHIQPSPLQCNRAMSGINNYTQHCKHQNTFLHDS
FQNVAAVCDLLSIVCKNRRHNCHQSSKPVNMTDCRLTSGKYPQCRYSAAAQYKFFIVACDPPQKSDPPYK
LVPVHLDSIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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