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Report for CCDS17987.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17987.1 Public Mus musculus 4 Osgin2 23 108 98 CCDS HistoryNCBI Gene:209212Re-query CCDS DB by CCDS ID:17987.1Re-query CCDS DB by GeneID:209212See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17987.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037198.9 ENSMUSP00000047473.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037198.9Link to Ensembl Protein Viewer:ENSMUSP00000047473.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000037198Re-query CCDS DB by Protein ID:ENSMUSP00000047473
Original member Current member NCBI NM_145950.5 NP_666062.3 Accepted alive Link to Nucleotide Sequence:NM_145950.5Link to Protein Sequence:NP_666062.3Re-query CCDS DB by Nucleotide ID:NM_145950Re-query CCDS DB by Protein ID:NP_666062Link to BLAST:NP_666062.3

Chromosomal Locations for CCDS 17987.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 15997968 15999000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 16001930 16002021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 16005357 16005548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 16006357 16006493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 16008601 16008755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 16013687 16013730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1653 nt):
ATGCCTGTGTGGTGCTGCCGCTGCTCCCTGGCCGGTCATTTCAGAAACTATAGTGACACTGAAACTGAAG
GA
GAGATTTTTAATTCTTTTGTGCAATATTTTGGTGACAATTTGGGGCCAAAAGTTAAAGGGATGCCATT
A
GTTGAAGAAACGTCTTTACTTGAAGATTCATCAGTGACTTTGCCTATGGTAATAATTGGAAATGGACCT
TCA
GGAATATGCCTTTCATATATGCTGTCAGGCTACAGACCGTATTTATCATCGGAAGCAATACATCCAA
AT
ACAATCTTACATAGTAAACTAGAAGAAGCAAGACATCTGTCCATTGTGGATCAGGACTTAGAATACCT
G
TCTGAGGGTCTTGAGGGGCGATCGTCCAATCCAGTGGCAGTCCTTTTTGACACCCTTCTTCACCCAGAT
GCT
GACTTCGGATATGAGTCTCCATCCATTCTGCACTGGAAATTGGAACAACATCATTATATCCCTCACT
TA
GTTCTTGGTAAGGGCCCGCCTGGTGGGGCATGGCATAATATGGAAGGTTCTATGTTGACAATCAGCTT
T
GGAAATTGGATGGAGCTTCCTGGACTTCAATTTAAAGACTGGATATCTAGCAAACGAAGGAACTTAAAG
GGG
GACCGTGTCATGCCGGAGGAAATAGCTCGCTACTACAAGCACTACGTAAAGGTCATGGGCCTTCAGA
AG
AATTTTCGAGAGAATACTTACATAACCTCTGTATCAAGACTCTATAGAGACCAAGGTGATAACGGTAG
T
CAAGACAGAGATATTTCCACAAAGCATTTACAGAACCAGAAGTCAAAATTTATCAAGAGAAACTGGGAA
ATC
AGAGGCTATCAGCGAATAGCAGGTGGTTCTCATGTTCCCTTTTGCCTCTTTGCTGAGAATGTAGCTC
TT
GCAACTGGAACTTTGGATTCTCCTGCCCATCTGGAAGTTGAAGGGGAAGAGTTTCCGTTTGTGTTTCA
T
TCGATGCCTGAGTTTGGAGCTGCTATAAACAAAGGAAAGCTGTGTGGCAGAGTGGACCCAGTGCTGATT
GTA
GGTTCCGGCCTTACTGCCGCTGATGCAGTGCTCTGTGCCTATAACAATAATATCCCTGTGATCCACG
TG
TTTCGCAGACGAGTAACTGATCCAAGCTTAATTTTCAAACAGCTTCCCAAAAAGCTGTATCCTGAGTA
C
CACAAAGTCTACCATATGATGTGTAGTCAGTCCTACTCTGCAGACTCAGGTCCTCTGTCTGATTATACC
AGC
TTTCCTGAGCACCGTGTGCTTTCCTTTAAGGCAGACATGAAATGCATTCTTCAAAGTGTCTCTGGAT
TG
AAGAAAATATTTAAGCTGTCTGCAGCTGTAATCTTGATAGGTTCTCATCCTAACCTATCTTTTCTAAA
G
GAACAAGGGTGTTACCTAGGCCGTAACTCAAGCCAGCCAATAACATGCAAGGGTAACCCTGTGGAGGTT
GAT
GCATACACCTATGAATGTGTTAAAGAAGCCAATCTTTTTGCTTTGGGCCCTTTGGTTGGAGATAATT
TC
GTTCGATTCTTAAAGGGAGGGGCATTGGGTGTTACTCGCTGTTTGGCTACAAGACAGAAGAAAAAGCA
G
CATTTGTTTGTTCAAAGAGGAGGAGGAGATGGGGTAGCTTAA


Translation (550 aa):
MPVWCCRCSLAGHFRNYSDTETEGEIFNSFVQYFGDNLGPKVKGMPLVEETSLLEDSSVTLPMVIIGNGP
S
GICLSYMLSGYRPYLSSEAIHPNTILHSKLEEARHLSIVDQ
DLEYLSEGLEGRSSNPVAVLFDTLLHPD
A
DFGYESPSILHWKLEQHHYIPHLVLGKGPPGGAWH
NMEGSMLTISFGNWMELPGLQFKDWISSKRRNLK
G
DRVMPEEIARYYKHYVKVMGLQKNFRENTYITSVSRLYRDQGDNGSQDRDISTKHLQNQKSKFIKRNWE
I
RGYQRIAGGSHVPFCLFAENVALATGTLDSPAHLEVEGEEFPFVFHSMPEFGAAINKGKLCGRVDPVLI
V
GSGLTAADAVLCAYNNNIPVIHVFRRRVTDPSLIFKQLPKKLYPEYHKVYHMMCSQSYSADSGPLSDYT
S
FPEHRVLSFKADMKCILQSVSGLKKIFKLSAAVILIGSHPNLSFLKEQGCYLGRNSSQPITCKGNPVEV
D
AYTYECVKEANLFALGPLVGDNFVRFLKGGALGVTRCLATRQKKKQHLFVQRGGGDGVA




Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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