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Report for CCDS21651.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21651.1 Public Mus musculus 7 Cckbr 23 108 98 CCDS HistoryNCBI Gene:12426Re-query CCDS DB by CCDS ID:21651.1Re-query CCDS DB by GeneID:12426See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21651.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033189.5 ENSMUSP00000033189.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033189.5Link to Ensembl Protein Viewer:ENSMUSP00000033189.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000033189Re-query CCDS DB by Protein ID:ENSMUSP00000033189
Original member NCBI NM_007627.5 NP_031653.1 Updated not alive Link to Nucleotide Sequence:NM_007627.5Link to Protein Sequence:NP_031653.1Re-query CCDS DB by Nucleotide ID:NM_007627Re-query CCDS DB by Protein ID:NP_031653
Current member NCBI NM_007627.6 NP_031653.1 Accepted alive Link to Nucleotide Sequence:NM_007627.6Link to Protein Sequence:NP_031653.1Re-query CCDS DB by Nucleotide ID:NM_007627Re-query CCDS DB by Protein ID:NP_031653Link to BLAST:NP_031653.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031653.1 453 P56481 453 100% 0 0

Chromosomal Locations for CCDS 21651.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 105426025 105426175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 105433583 105433834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 105433995 105434244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 105434520 105434695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 105434890 105435422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1362 nt):
ATGGATCTGCTCAAGCTGAACCGCAGCTTGCAGGGACCAGGACCCGGGTCAGGGTCTTCTTTGTGCCGCC
CGGGTGTCTCCCTCCTCAACAGCAGTAGCGCCGGCAACCTCAGCTGCGAGACCCCTCGTATCCGCGGAAC
CGGGACCAGAGAATTGGAGTTGACCATTCGAATCACCCTTTATGCGGTGATCTTTCTGATGAGTGTTGGC
GGAAACGTGCTCATCATTGTGGTCCTGGGACTGAGCCGACGCCTAAGAACGGTCACCAACGCCTTCCTAC
TCTCCCTGGCAGTCAGCGACCTCCTGCTGGCTGTCGCTTGCATGCCCTTCACACTCCTGCCCAACCTCAT
GGGCACATTCATCTTCGGCACAGTCATCTGCAAGGCCGTTTCCTACCTCATGGGGGTATCAGTGAGTGTG
TCCACTCTAAATCTCGCGGCCATCGCCCTGGAGCGATACAGCGCCATCTGCCGACCACTGCAAGCACGAG
TGTGGCAGACACGCTCCCACGCAGCTCGGGTGATCTTAGCCACGTGGCTGCTGTCTGGATTGCTTATGGT
CCCCTACCCCGTGTACACCGTGGTGCAGCCAGTGGGGCCTCGAATACTGCAGTGCATGCATCTCTGGCCC
AGTGAACGTGTCCAACAAATGTGGTCCGTGCTTCTGCTAATACTGCTGTTCTTCATCCCGGGCGTGGTTA
TGGCGGTGGCCTATGGACTCATCTCCCGCGAACTCTACCTAGGGCTCCGCTTTGATGGTGATAATGACAG
CGAGACCCAAAGCCGGGTCCGAAACCAAGGGGGTCTGCCGGGTGGGGCAGCAGCACCAGGGCCTGTCCAC
CAGAACGGGGGTTGCCGGCATGTGACCAGCCTGACTGGGGAAGACAGTGATGGCTGCTACGTGCAACTTC
CGCGTTCCCGACTGGAGATGACAACGCTGACCACGCCCACTACTGGGCCAGGCCCTGGCCCTCGGCCCAA
CCAGGCCAAGCTGCTGGCTAAGAAGCGGGTGGTGCGAATGCTGCTGGTGATTGTTTTGCTTTTTTTCGTG
TGTTGGCTGCCAGTGTACAGCGCCAACACGTGGCGTGCCTTCGATGGCCCAGGCGCGCGCCGAGCACTCG
CAGGGGCCCCTATCTCTTTCATCCACTTGCTGAGCTACACCTCTGCTTGTGCCAACCCCCTGGTCTACTG
TTTCATGCACCGCCGATTCCGCCAGGCCTGCCTGGACACATGTGCCCGCTGTTGCCCACGCCCTCCACGA
GCTCGCCCACGGCCTCTTCCGGATGAGGATCCTCCTACCCCCTCCATCGCTTCTCTGTCCAGGCTAAGCT
ATACCACCATCAGCACGCTGGGACCTGGCTGA

Translation (453 aa):
MDLLKLNRSLQGPGPGSGSSLCRPGVSLLNSSSAGNLSCETPRIRGTGTRELELTIRITLYAVIFLMSVG
GNVLIIVVLGLSRRLRTVTNAFLLSLAVSDLLLAVACMPFTLLPNLMGTFIFGTVICKAVSYLMGVSVSV
STLNLAAIALERYSAICRPLQARVWQTRSHAARVILATWLLSGLLMVPYPVYTVVQPVGPRILQCMHLWP
SERVQQMWSVLLLILLFFIPGVVMAVAYGLISRELYLGLRFDGDNDSETQSRVRNQGGLPGGAAAPGPVH
QNGGCRHVTSLTGEDSDGCYVQLPRSRLEMTTLTTPTTGPGPGPRPNQAKLLAKKRVVRMLLVIVLLFFV
CWLPVYSANTWRAFDGPGARRALAGAPISFIHLLSYTSACANPLVYCFMHRRFRQACLDTCARCCPRPPR
ARPRPLPDEDPPTPSIASLSRLSYTTISTLGPG


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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