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Report for CCDS22723.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22723.1 Public Mus musculus 8 Mthfsd 23 108 98 CCDS HistoryNCBI Gene:234814Re-query CCDS DB by CCDS ID:22723.1Re-query CCDS DB by GeneID:234814See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22723.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000047282.11 ENSMUSP00000044172.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047282.11Link to Ensembl Protein Viewer:ENSMUSP00000044172.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000047282Re-query CCDS DB by Protein ID:ENSMUSP00000044172
Original member NCBI NM_172761.3 NP_766349.1 Updated not alive Link to Nucleotide Sequence:NM_172761.3Link to Protein Sequence:NP_766349.1Re-query CCDS DB by Nucleotide ID:NM_172761Re-query CCDS DB by Protein ID:NP_766349
Current member NCBI NM_172761.4 NP_766349.1 Accepted alive Link to Nucleotide Sequence:NM_172761.4Link to Protein Sequence:NP_766349.1Re-query CCDS DB by Nucleotide ID:NM_172761Re-query CCDS DB by Protein ID:NP_766349Link to BLAST:NP_766349.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766349.1 353 Q3URQ7-2 353 100% 0 0

Chromosomal Locations for CCDS 22723.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 121098712 121099152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121101119 121101244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121101424 121101536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121102914 121103004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121104392 121104505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121105718 121105831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 121106870 121106932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1062 nt):
ATGGAATCCCATGATATAGCTGACTTTCCCCGACCCGTTCATCACAGGATCCCCAACTTCAAGGGTGCTG
CTCAGGCTGCGGGGCACCTCCCACACCTGCAAGCTTTCCATGTGGCCAGAACCATTAAAGTCAACCCGGA
CGCTCCTCAGAGAAACGCCCGCTTCCTGGTGCTGGAGAGCAAAAAAACACTGCTGGTCCCAACACCACGA
CTGCGAACAGGGCTGTTTAACAAGATCACGCCACCCCCTGGAGCCACCAAAGACATTCTGAGGAAATGTG
CCACCTCCCAGGGTGTGCGGAATTTCAGCGTCCCAGTGGGCTTGGATTCCAGTGTTCTTGTGGATCTAGT
TGTGGTGGGATCTGTTGCTGTGTCTGAGAAAGGCTGGCGAATTGGGAAAGGGGAAGGCTATGCTGATCTT
GAATACGCCATGATGGTGTCAATGGGAGCCGTCCACAAGGGGACACCGGTTGTCACAATTGTCCACGACT
GCCAGGTCGTAGACATCCCCGAGGCTCTTGTGGAGGACCACGACCTCACAGTTGACTACATCCTCACTCC
CACCAGGGTCATCACTACAGGCTGTGCACGCCCAAAGCCAACGGGCATCATGTGGTCCAAGGTCAGCTGT
GAGATGCTTACGAAAATCCCAGTGCTCAGGAACCTCCGGGAGAGAGAGAAACAGGCTGGGAAGGATGTCA
CTCTCCGGGACGAGCCTGGCAGCCAGCAGCCAGCTCCAGGCCCCATCAGGAGACCCCAGGATAGACCACA
AACAGGTTCTCGAGGAGGGTCCCGTAGTCCCCTGCAGGGGGCGGACACCCAACTAGCTGCCACTGTGTGT
GTGGGAAACCTGCCCTTCACTACTCGTGTGCGTGAGCTGAAGAGAGTCCTCCAGGAGCTGGGGGTGGTGC
CCCTGAGGCTTACCTGGCAGGGGCCACAGCACAGGGCAGTTCTACACTATACAGACTCAGCTGCTGCCCA
GCAGGCCGCCTCTCTCCTACAGGGCCTACGTCTGGGTGCCAACGCCTTGAGGGTGTCACTGGGGCAGCAG
AGGGATATGTGA

Translation (353 aa):
MESHDIADFPRPVHHRIPNFKGAAQAAGHLPHLQAFHVARTIKVNPDAPQRNARFLVLESKKTLLVPTPR
LRTGLFNKITPPPGATKDILRKCATSQGVRNFSVPVGLDSSVLVDLVVVGSVAVSEKGWRIGKGEGYADL
EYAMMVSMGAVHKGTPVVTIVHDCQVVDIPEALVEDHDLTVDYILTPTRVITTGCARPKPTGIMWSKVSC
EMLTKIPVLRNLREREKQAGKDVTLRDEPGSQQPAPGPIRRPQDRPQTGSRGGSRSPLQGADTQLAATVC
VGNLPFTTRVRELKRVLQELGVVPLRLTWQGPQHRAVLHYTDSAAAQQAASLLQGLRLGANALRVSLGQQ
RDM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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