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Report for CCDS52963.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52963.1 Public Mus musculus 9 Dlec1 23 108 98 CCDS HistoryNCBI Gene:320256Re-query CCDS DB by CCDS ID:52963.1Re-query CCDS DB by GeneID:320256See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 52963.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000165231.7 ENSMUSP00000128874.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000165231.7Link to Ensembl Protein Viewer:ENSMUSP00000128874.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000165231Re-query CCDS DB by Protein ID:ENSMUSP00000128874
Original member Current member NCBI NM_177117.5 NP_796091.2 Accepted alive Link to Nucleotide Sequence:NM_177117.5Link to Protein Sequence:NP_796091.2Re-query CCDS DB by Nucleotide ID:NM_177117Re-query CCDS DB by Protein ID:NP_796091Link to BLAST:NP_796091.2

Chromosomal Locations for CCDS 52963.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 119102515 119102925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119105802 119105952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119110101 119110211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119112057 119112244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119112409 119112626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119114964 119115042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119119648 119119735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119120803 119120976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119121788 119121924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119123145 119123237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119124120 119124210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119124756 119124918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119126154 119126346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119126988 119127046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119127416 119127584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119128018 119128111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119128264 119128394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119128500 119128658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119129999 119130138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119134469 119134622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119135184 119135294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119136641 119136765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119137204 119137383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119137539 119137609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119138038 119138189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119138774 119138892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119139376 119139446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119142578 119142788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119142876 119142984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119143066 119143191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119143307 119143401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119143584 119143668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119143878 119144081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119146016 119146177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119146979 119147132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119147357 119147480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119147571 119147694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5226 nt):
ATGGATTCCGAGAGCAAGGAAGAGCAGCAATGCACAGCTTCCTCGGCCGTTATGTCGTCCTTGGAGACCC
AGTTTTTGTCTGTCCCACACCAGCTCGAGTCCGCCAGTCTCAGCTGGTCCATCAGGAAGTCCTTGCATTC
CTCGACCGTCTTAATGGATGATTGCCATTTCGGCTTCCCTACGCGGTCCCTCCGCGCCGGGTTCCACGCG
CTCCCTCCACTCCCGGAGCCGCAGACGCTGCGTCTACGCCCCGCCTCGTTGCGCACGCAGGAAATCTCAC
ATCTGCTTGCCCGAGTCTTCCGAAACTTGTACACCGCCCAGGTGATCGGAGATGACTTGAGCGACAGTTT
GATCAAGGCCCGCGGCAGTGAGGATGCGCGCCACGAAGAGTTCCTTGACCAGCTGCAGCAGGCGCGAGCC
ATCTATAAACAGCGTCTGGATGAAGCCGCCATGTTGGAGAGACATATCATGCAGGCCCGTGCACGGGATA
TTGCAGAAACAGAACACACCACCAAACAGAGCAGACTACAGGTTGTGGAGACCCCTGTCAAACTGCCCCC
AGTGAAGACAGCCTTCAGGTGGTGTCTAGACAGCAAGTTAATGCGAAAACATCACTTAATCTCTACAGAG
GATTACTACACTGATCCCGTGCCGTTTTGCCCAGCACCCAAAGACAAATCCACCCTTGGATGTTCAAAGC
TGACGTTTAGCTGTGAGCAGCGTTTCCTGCGCAAGTCAGAGCTGGACAGGGAGGCTGAGGAGCACTGCAG
GCAGCTCACAGAGTGTGACGACTTTGAGTACACCGTGGACAGCTTGGGCTCCATCTCGAAGGCCAAAGAG
AGGACCACAGATTCTGTCAAGAAGACAAGCAGGCCAAAGAATAAGAAGTGGATGGAACACCTGCAGGTGC
CGCAGAGAGCCCTGGACAGGCGGCTGCTCGCCAGCATGGAGAACAGGAATCACTTCCTGAAAAACCCTCG
GTTTTTCCCGCCTAACACACCACATGGAGGCAAGTCTCTCATCGTCCCTTTGAGCAAGCCAGAGAGAAGA
GCATCCCTGAATGCAGAGCCTGAGTGGAGCTGTACAGATGCCCCCGTGTTCCTGGCGAAGCCATCAGTTG
GATTTTTCACAGATTACGAAATTGGACCCGTTTACGAGATGGTGATCGCTCTACAGAACACCACCTCCAC
CAGCCGATTCTTGCGTGTCCTCCCACCGTCCTCTCCGTACTTCGCTCTGGGACTTGGGATGTTCCCAGGA
AAAGGCGGAATAGTGGCTCCCGGGATGACCTGCCAGTACATCGTCCAGTTCATCCCGGACTGTCTTGGCG
ATTTTGATGATTTCATTTTGGTGGAGACACAGTCTCCCCACACGCTGGTAATCCCCCTGCAGGCCCGGAG
ACCGCCGCCAGTGCTGACCTTGTCACCAGTGTTGGACTGCGGCCACTGCCTCATTGGAGGGGTGAAGATA
ACCAAATTCATCTGCAAAAATGTGGGCTTCAGCGTCGGCAAATTCTGTATCATGCCCCAAAAGAGCTGGC
CGCCACCGAGTTTCCGGGCTGTTGCAACTACTGGCTTTGTAGAGCAGCCTCCTTTTGGAGTAATGCCTTC
CGTGTTTGAGCTGGCCCCAGGGTACGCCATACTGTTGGAGGTCTTGTTCCTCCCTACTGGCCTAGGACAG
GCAGAAGAGACCTTCATCATCGTGTGTGACAACTGTCAGATAAAGGAGGTGGTCGTCGTAGGGACAGGGC
AGCTGGTGGCTTTGGATCTGATTCATATTTCTGGTGGAAAAAATGAGCCAGACCCAGGAGAGCTGAAAGA
TTTAACAGCCCAGTACTTTATCCGGTTTGAGCCTGAAAACGTCCAGTCCACCGCAAAGAAGCAGCTCATC
ATCAGAAATGCTACACACGTGGAGCTGGCCTTCCACTGGCAGATCATGAAACCCAACCTGCAGCCTCTGA
TGCCTGGAGAGACACACAGCTCAGACAGCATCAAATGCCACCCTGACAGGGAGACAGCCTTCTCCATCAT
CCCCGAGAAGGGCATCCTCGAGTCCCACTCGGACCAAGAGTTCATCCTGAGTTTTTCACCTTACAAGCTC
AAGTGTTTCCACAGTGTACTGCAAATGGTTCTAGAAGCTGTGCCCGAGCCCTTGAGCTCAGGGTTGGAGA
ACCTGGGGGACTACTCCTACTCAGTGGATGACATGATCGTCCTGGAAATCGAGGTGAAAGGCTTGGCGGA
ACCCTTCCAGGTCCTTTTAGAGCCGTACGCCCTCATCATCCCTGGGGAGAACTACATTGGCATCACCGTG
AAGAAAGATTTTAAGATGTGGAACAACAGCAAGTCACCCATCAGATACATGTGGGGGAAGATCAGCCACT
GCCATATCATCGAAGTGGAGCCCTGCACTGGGGTGATAGAGCCCAATGAGGTCGGAGATTTTGAGTTAAA
CCTAACGGGTGGGGTGCCTGGCCCAACCAGCCAGGACCTGGAGTGTGAAATCAAAGACTCACCATGCCCG
GTGGTACTCCACATTGAGGCCTCATTTAAGGGACCTGCCTTGACCATTGATGTCCCAGCCCTTCAGTTTG
GTCTGCTTCGCCTGGGAAAGAAGGCTTCCATCTCCATCCAGATCCGGAATGTCAGCCAGCTGTCCGCCGT
GTGGCATTTGAAGGAGAGCCCAGTCTGCCTGGCAGAGAGAGATGAGGATGTGTCCCCCTTCGACATCGAG
CCTTTCTGCGGCCAGCTTCTCCCTCTGGGGGAGTGCAGAGTGACCATCACCCTTGAGGCCTCCCAGTGTC
AGCGGCTGCAGACAGTCCTGGAGCTGGAAGTGGAGAACGGGTCCGGGAGCTACCTTCCCGTGTACGCTGA
GGTGCAGCAGCCTCACGTGTACCTGAAGAACAGCCACTTGGAGTTCAGCAACCTCTACCTGGGCGTGTCC
ACAAAGTCAAGGACCACGCTGGTCAATGGCACACTCCTGCCCACCCGGTTCCACTGGGGAAAGCTTCTGG
GACCTCAAGCAGATTTGTGCACAATGACAGTCTCTCCCACACAGGGCCTGCTGGGCCCCAGTGAAGAGCT
CCAACTCACCTTGGAGTTGACGACCCACACAGAGGAAAAGCTGACCAATTTGGTTCTCCTTTGTCACGTG
TCTGGCATGGAGAAGCCGCTGGTCCTGGGCATCTCTGGGAAGCCCCTGGGACTTCAGGTGACCATCTCCA
TAGTGGAATCTGACGGAAGCAGCACCACCAGCACTACACAGGAGGAGCTGCGCTTGGACTTCGGCTCGAA
GGTGCCACTGAGGACGCCCGTGATTCGCCATATCATCCTGACAAACTGCTCCCCGATACAGACCCCATTC
ACCCTCACACTGGAGTACTTCGGGAGCTCCCAGGACAGCCTGTACAAGAAGACCAGCGTCCCTGACGTGC
CTCCTGCCCTGCTGAAGACAGCACGCATCCAGCAGCACGTGGCCAAGAAGGAAAGGCTGGACTTTGTGGA
GAGCATGTTATCTCACAGGAAAGGAGCTGCCTTCCTTCCCCACATCTCCCAGGGCATGCTGGGAGCCTAC
CAGGAGCTATGTATTGACATCACAGGCTGTGCCAACATGTGGGGCGAGTACTGGGATGAGCTCCTCTGCG
TGGTGGGAGACCTGCCGGTCACTGTCATCCCGGTATACATGGCCGTGGTGGGCTGCCCTATCAGCTCCCT
GAGGAATACGTGCTACAGTGTGGCCCCATTCCAGAAGGAGCCTATCACCAGGTTTGGGACCCAGATCTCT
GGAGGAGATACAGTCACCAGATCTCTCCGTCTGTATAACTCCAGTCACTGTGACATCCGCCTAGACTGGG
AGACCTACATCCCAGAAGAAAAGGCGGACCGGCTGCTGGAGCTGCTTGTGTTTTATGGGCCACCCTTCCC
ACTGCGAGATCAAGACGGCAGTGAGATTGTGTGCCCTGAGACCTCGGAGGCCAGCTTACCAGGGTCTCCA
TGCCCCTCCAATGTCTCAGTGTCTAGCCACACTGTCCCCTCAACGGTGAGCAGTGGCGGCGGCGGCGGCA
CCAGGGCCGAAGAGCAGATCATGTCTGTCATCCTGCAGAGGCACGAGGCAGTGCCCGCCGGCCACATATA
CCGTATCAGCCCCAAGCAGTTGGTCATCCCAGCTGGAGACCACAGGACCATCTACATCTCCTTCACGCCC
ACGGTGCTCGACCCAGGGGTCATGCACAAGGTGGGGTATACTGGCTATGCCCTGGGCTTCATGAGCTTGG
ATAAGGAGACAGACAGACAGATTCCAGGCCGAATGCGACGCCTTCAGGACTTTGCCGTGAGCCCCCTGAG
ACTGGATCTGAATGGCCACGTGAGACACGCGCAGCTGCACGTCGAGCTGGACAGCAGTGGCTACTTGGAA
TTCTGGTGCCAGGCCAGCGACCTTATCCCCCAAAATCCCTGCAGTGGGGTGCTAAGTGACCGGATTACCA
CCCGCCATCTGAAACTGACCAACACCACTGAAATCCTGTATGACTTCCAGGCCCGGGTCTCCAGGCCCTT
CTTCATTTCTCAAGGTGGGGCCAGCTGGGACAGCAGAGCCCCTCATCAGTGTGAAGAAGGGACGGCCTCC
ACAGGCCAGTGGCTGATGATCCGTCCTCAGGACAACATGCTGGTGGATGTGTCCTTCTCACTGTCCCTGG
AACTGCTGTCCTATCAGAAACTCTCGGCCGACCAGATGTTGCCCGGAGTGGATATTCAGGAGAGCGAGAA
CGGAGAGAGAAAGATGGTGTTCACACAGAACCTACTCCTGGGCTTCACCAACCAGACTGTTCAGGAGGTG
CCCCTGCGGGCCTTTGTGACCCTGCCAGCGCCACAGCTCTCCACCAGCTGGGTGGACTTCGGGACCTGTC
TCGTGAACCAGCAGCACACCCGGCAGATCTACCTGATGAACCTCAGCTGCTGCCTGAGCTACTGGACGGT
GCTGTTGGGACAAGAGGAACCAGCCAGGGAGGATCATGCGTTTGGGGTCTCCCCAGGCAGTGGACTGCTG
GAGGCCCGAGCCACCAATGCACCCCCTACCTCCAGCCCACTTCAGGTGTTCTTCAACCCTAGGAGCAGCA
TCCTCTATGAATCTACACTGGTGGTGGAAGGCGTGCTGAGCGAGAAGCCCTGTGTCCTGAGGCTTCGGGG
CCTAGGCTCTTACGATGAAAGATACGTGAAATTCCATGAGTTCTGA

Translation (1741 aa):
MDSESKEEQQCTASSAVMSSLETQFLSVPHQLESASLSWSIRKSLHSSTVLMDDCHFGFPTRSLRAGFHA
LPPLPEPQTLRLRPASLRTQEISHLLARVFRNLYTAQVIGDDLSDSLIKARGSEDARHEEFLDQLQQARA
IYKQRLDEAAMLERHIMQARARDIAETEHTTKQSRLQVVETPVKLPPVKTAFRWCLDSKLMRKHHLISTE
DYYTDPVPFCPAPKDKSTLGCSKLTFSCEQRFLRKSELDREAEEHCRQLTECDDFEYTVDSLGSISKAKE
RTTDSVKKTSRPKNKKWMEHLQVPQRALDRRLLASMENRNHFLKNPRFFPPNTPHGGKSLIVPLSKPERR
ASLNAEPEWSCTDAPVFLAKPSVGFFTDYEIGPVYEMVIALQNTTSTSRFLRVLPPSSPYFALGLGMFPG
KGGIVAPGMTCQYIVQFIPDCLGDFDDFILVETQSPHTLVIPLQARRPPPVLTLSPVLDCGHCLIGGVKI
TKFICKNVGFSVGKFCIMPQKSWPPPSFRAVATTGFVEQPPFGVMPSVFELAPGYAILLEVLFLPTGLGQ
AEETFIIVCDNCQIKEVVVVGTGQLVALDLIHISGGKNEPDPGELKDLTAQYFIRFEPENVQSTAKKQLI
IRNATHVELAFHWQIMKPNLQPLMPGETHSSDSIKCHPDRETAFSIIPEKGILESHSDQEFILSFSPYKL
KCFHSVLQMVLEAVPEPLSSGLENLGDYSYSVDDMIVLEIEVKGLAEPFQVLLEPYALIIPGENYIGITV
KKDFKMWNNSKSPIRYMWGKISHCHIIEVEPCTGVIEPNEVGDFELNLTGGVPGPTSQDLECEIKDSPCP
VVLHIEASFKGPALTIDVPALQFGLLRLGKKASISIQIRNVSQLSAVWHLKESPVCLAERDEDVSPFDIE
PFCGQLLPLGECRVTITLEASQCQRLQTVLELEVENGSGSYLPVYAEVQQPHVYLKNSHLEFSNLYLGVS
TKSRTTLVNGTLLPTRFHWGKLLGPQADLCTMTVSPTQGLLGPSEELQLTLELTTHTEEKLTNLVLLCHV
SGMEKPLVLGISGKPLGLQVTISIVESDGSSTTSTTQEELRLDFGSKVPLRTPVIRHIILTNCSPIQTPF
TLTLEYFGSSQDSLYKKTSVPDVPPALLKTARIQQHVAKKERLDFVESMLSHRKGAAFLPHISQGMLGAY
QELCIDITGCANMWGEYWDELLCVVGDLPVTVIPVYMAVVGCPISSLRNTCYSVAPFQKEPITRFGTQIS
GGDTVTRSLRLYNSSHCDIRLDWETYIPEEKADRLLELLVFYGPPFPLRDQDGSEIVCPETSEASLPGSP
CPSNVSVSSHTVPSTVSSGGGGGTRAEEQIMSVILQRHEAVPAGHIYRISPKQLVIPAGDHRTIYISFTP
TVLDPGVMHKVGYTGYALGFMSLDKETDRQIPGRMRRLQDFAVSPLRLDLNGHVRHAQLHVELDSSGYLE
FWCQASDLIPQNPCSGVLSDRITTRHLKLTNTTEILYDFQARVSRPFFISQGGASWDSRAPHQCEEGTAS
TGQWLMIRPQDNMLVDVSFSLSLELLSYQKLSADQMLPGVDIQESENGERKMVFTQNLLLGFTNQTVQEV
PLRAFVTLPAPQLSTSWVDFGTCLVNQQHTRQIYLMNLSCCLSYWTVLLGQEEPAREDHAFGVSPGSGLL
EARATNAPPTSSPLQVFFNPRSSILYESTLVVEGVLSEKPCVLRLRGLGSYDERYVKFHEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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