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Report for CCDS57753.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57753.1 Public Mus musculus X Btg1b 23 108 98 CCDS HistoryNCBI Gene:436199Re-query CCDS DB by CCDS ID:57753.1Re-query CCDS DB by GeneID:436199See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 57753.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000184432.2 ENSMUSP00000139062.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000184432.2Link to Ensembl Protein Viewer:ENSMUSP00000139062.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000184432Re-query CCDS DB by Protein ID:ENSMUSP00000139062
Original member NCBI NM_001243943.1 NP_001230872.1 Updated not alive Link to Nucleotide Sequence:NM_001243943.1Link to Protein Sequence:NP_001230872.1Re-query CCDS DB by Nucleotide ID:NM_001243943Re-query CCDS DB by Protein ID:NP_001230872
Current member NCBI NM_001243943.2 NP_001230872.1 Accepted alive Link to Nucleotide Sequence:NM_001243943.2Link to Protein Sequence:NP_001230872.1Re-query CCDS DB by Nucleotide ID:NM_001243943Re-query CCDS DB by Protein ID:NP_001230872Link to BLAST:NP_001230872.1

Chromosomal Locations for CCDS 57753.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 38013908 38014393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (486 nt):
ATGATTGGTGAGATCTGTGCTGCAGCAACCTTCATCTGCAAGTTCCTCTGCACCAAGGGCCTCAGGAATG
AG
GAGCTGCTGCAGACCTTCAGCCAGAGCCTGCAGGAGCTGCTGGTAGAACACTACAAACACCACTGGTT
C
CCAGAGCAACCCTGCAAGGGATCGGGTTACAGGTGTATTCGCATCAACCATAAGATGGATCCTCTTGTC
AGT
CAGGCTGCGCAGCAGATTGGACTGAGCAGTAGAGAGTTGTTCAGGCTTCTCCCAAGTGAACTCACAC
TG
TGGGTTGATCCCTATGAAGTGTCCTACAGGATTGGAGAGGATGGCTCCATCTGTGTGCTGTATGAAGC
C
TCACCAGTGGGAGGTAGCTCTCACAACAGCACCAATGCACAAATGGTAGATAGCAGAATCAGCTTTAAG
GAA
GAACCTCTTTTGGGCAGAACAGGCCCTTCTAAAAACTACAATATGATGGCTGTATCGGTTTAA


Translation (161 aa):
MIGEICAAATFICKFLCTKGLRNEELLQTFSQSLQELLVEHYKHHWFPEQPCKGSGYRCIRINHKMDPLV
S
QAAQQIGLSSRELFRLLPSELTLWVDPYEVSYRIGEDGSICVLYEASPVGGSSHNSTNAQMVDSRISFK
E
EPLLGRTGPSKNYNMMAVSV




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser