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Report for CCDS45134.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45134.1 Public Homo sapiens 14 DNAL1 24 110 108 CCDS HistoryNCBI Gene:83544Re-query CCDS DB by CCDS ID:45134.1Re-query CCDS DB by GeneID:83544See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45134.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000553645.7 ENSP00000452037.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000553645.7Link to Ensembl Protein Viewer:ENSP00000452037.1Re-query CCDS DB by Nucleotide ID:ENST00000553645Re-query CCDS DB by Protein ID:ENSP00000452037
Original member Current member NCBI NM_031427.4 NP_113615.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031427.4Link to Protein Sequence:NP_113615.2Re-query CCDS DB by Nucleotide ID:NM_031427Re-query CCDS DB by Protein ID:NP_113615Link to BLAST:NP_113615.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_113615.2 190 Q4LDG9-1 190 100% 0 0

Chromosomal Locations for CCDS 45134.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 73645040 73645042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73654847 73654885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73658847 73658956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73661987 73662042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73671542 73671597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73687259 73687385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73689375 73689515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73695902 73695942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGGCGAAAGCAACAACAATCAAAGAAGCCTTAGCGAGATGGGAAGAGAAAACTGGCCAGAGGCCATCTG
AAGCCAAAGAGATAAAACTTTATGCCCAGATTCCCCCTATAGAGAAGATGGATGCATCCTTGTCCATGCT
TGCTAATTGCGAGAAGCTTTCACTGTCTACAAACTGCATTGAAAAAATTGCCAACCTGAATGGCTTAAAA
AACTTGAGGATATTATCTTTAGGAAGAAACAACATAAAGAACTTAAATGGACTGGAGGCAGTAGGGGACA
CATTAGAAGAACTGTGGATCTCCTACAATTTTATTGAGAAGTTGAAAGGGATCCACATAATGAAGAAATT
GAAGATTCTCTACATGTCTAATAACCTGGTAAAAGACTGGGCTGAGTTTGTGAAGCTGGCAGAACTGCCA
TGCCTCGAAGACCTGGTGTTTGTAGGCAATCCCTTGGAAGAGAAACATTCTGCTGAGAATAACTGGATTG
AAGAAGCAACCAAGAGAGTGCCCAAACTGAAAAAGCTGGATGGTACTCCAGTAATTAAAGGGGATGAGGA
AGAAGACAACTAA

Translation (190 aa):
MAKATTIKEALARWEEKTGQRPSEAKEIKLYAQIPPIEKMDASLSMLANCEKLSLSTNCIEKIANLNGLK
NLRILSLGRNNIKNLNGLEAVGDTLEELWISYNFIEKLKGIHIMKKLKILYMSNNLVKDWAEFVKLAELP
CLEDLVFVGNPLEEKHSAENNWIEEATKRVPKLKKLDGTPVIKGDEEEDN


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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