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Report for CCDS82100.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82100.1 Public Homo sapiens 17 COPRS 24 110 108 CCDS HistoryNCBI Gene:55352Re-query CCDS DB by CCDS ID:82100.1Re-query CCDS DB by GeneID:55352See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82100.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378634.6 ENSP00000367901.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378634.6Link to Ensembl Protein Viewer:ENSP00000367901.2Re-query CCDS DB by Nucleotide ID:ENST00000378634Re-query CCDS DB by Protein ID:ENSP00000367901
Original member Current member NCBI NM_001330176.2 NP_001317105.1 Accepted alive Link to Nucleotide Sequence:NM_001330176.2Link to Protein Sequence:NP_001317105.1Re-query CCDS DB by Nucleotide ID:NM_001330176Re-query CCDS DB by Protein ID:NP_001317105Link to BLAST:NP_001317105.1

Chromosomal Locations for CCDS 82100.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 31852139 31852308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31852812 31853030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31856799 31856865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31858758 31858820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (519 nt):
ATGGGAGGTGACGCTGGTGACCGAGAGCCGGGGCCCGCTGCCAGGAGCCTGGGCGAGGGCCAGGCTGGCT
TTGCTACAGCTGACCACTCCAGTCAGGAGAGAGAGACTGAGAAGGCTATGGATCGACTAGCCCGTGGAAC
ACAGAGCATTCCTAATGACAGTCCTGCCCGGGGTGAGGGCACCCATTCTGAAGAGGAAGGCTTTGCCATG
GATGAGGAGGACTCTGATGGAGAACTGAATACCTGGGAGCTGTCAGAAGGGACAAACTGTCCACCCAAGG
AACAGCCTGGCGATCTTTTTAATGAGGACTGGGACTCGGAGTTGAAAGCAGATCAAGGGAATCCATATGA
TGCTGACGACATCCAGGAGAGCATTTCTCAAGAGCTTAAACCTTGGGTGTGCTGTGCCCCACAAGGAGAC
ATGATCTATGACCCCAGCTGGCACCATCCGCCTCCACTGATACCCTATTATTCCAAGATGGTCTTTGAAA
CAGGACAGTTTGACGATGCTGAAGATTGA

Translation (172 aa):
MGGDAGDREPGPAARSLGEGQAGFATADHSSQERETEKAMDRLARGTQSIPNDSPARGEGTHSEEEGFAM
DEEDSDGELNTWELSEGTNCPPKEQPGDLFNEDWDSELKADQGNPYDADDIQESISQELKPWVCCAPQGD
MIYDPSWHHPPPLIPYYSKMVFETGQFDDAED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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