NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS2525.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2525.1 Public Homo sapiens 2 ESPNL 24 110 108 CCDS HistoryNCBI Gene:339768Re-query CCDS DB by CCDS ID:2525.1Re-query CCDS DB by GeneID:339768See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2525.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343063.8 ENSP00000339115.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343063.8Link to Ensembl Protein Viewer:ENSP00000339115.3Re-query CCDS DB by Nucleotide ID:ENST00000343063Re-query CCDS DB by Protein ID:ENSP00000339115
Original member Current member NCBI NM_194312.4 NP_919288.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_194312.4Link to Protein Sequence:NP_919288.2Re-query CCDS DB by Nucleotide ID:NM_194312Re-query CCDS DB by Protein ID:NP_919288Link to BLAST:NP_919288.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_919288.2 1005 Q6ZVH7-1 1005 100% 0 0

Chromosomal Locations for CCDS 2525.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 238100420 238100713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238101941 238102131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238104656 238104842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238107791 238107973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238116903 238117034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238125270 238125384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238127622 238127734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238128707 238128904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238130128 238131732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3018 nt):
ATGGAGAAGCAGCGGGCACTCGTGGCCGCCAAGGATGGGGATGTGGCGACGTTGGAGCGGCTGCTGGAGG
CTGGCGCCCTGGGCCCGGGCATCACCGATGCTCTGGGGGCCGGCCTGGTTCACCACGCCACCCGGGCTGG
CCACCTGGACTGCGTCAAGTTCTTGGTGCAGCGGGCCCAGCTGCCCGGCAACCAGCGGGCCCACAACGGG
GCCACCCCAGCGCATGACGCCGCTGCCACGGGCAGCCTGGCCGAGCTGTGCTGGCTGGTCCGCGAGGGGG
GCTGCGGTCTGCAGGACCAAGATGCCTCGGGCGTCTCCCCGCTGCACCTGGCCGCCCGTTTTGGACACCC
AGTGCTGGTGGAGTGGCTGCTCCACGAGGGCCACTCGGCCACGCTAGAGACCCGGGAGGGAGCCCGGCCG
CTGCACCACGCTGCCGTCAGTGGGGACCTGACCTGCCTCAAGCTCCTGACAGCCGCGCATGGCAGCAGCG
TGAACCGGCGGACACGCAGTGGCGCCTCCCCACTCTACCTGGCCTGCCAGGAGGGCCACCTGCACCTGGC
CCAGTTCCTGGTGAAGGACTGTGGCGCTGACGTGCACCTTCGTGCTCTCGATGGCATGAGCGCCCTGCAC
GCTGCCGCCGCCCGTGGCCACTACTCCCTCGTCGTCTGGCTGGTCACATTCACCGACATCGGACTCACGG
CACGGGACAATGAGGGGGCCACGGCCCTGCACTTTGCAGCCCGAGGCGGCCACACGCCCATTCTAGACCG
ACTCCTGCTCATGGGTACCCCCATCCTGAGAGACTCCTGGGGTGGGACCCCCCTCCACGACGCAGCAGAG
AACGGGCAGATGGAGTGCTGCCAGACCCTAGTCTCCCACCACGTGGACCCCTCCCTGCGGGATGAAGATG
GTTACACGGCGGCAGACCTGGCGGAGTACCATGGACACCGGGACTGCGCCCAGTACCTGCGGGAGGTGGC
CCAGCCGGTGCCCCTGCTGATGACGCCCCCACCACCACCGTTCCCCCCACCTCCACTGTTGGCCACGAGG
CGCTCCCTGGAGGATGGAAGAAGAGGAGGCCCAGGGCCAGGGAACCCCAGCCCCATGTCCCTCAGCCCGG
CCTGGCCTGGCCATCCTGACCAGCCTCTTCCCAGGGAGCAGATGACCAGCCCGGCCCCTCCGAGGATCAT
CACCAGTGCCACGGCTGACCCCGAGGGGACAGAGACGGCGCTGGCGGGGGACACCTCAGATGGCCTGGCC
GCACTACAGCTGGATGGGCTGCCCTCAGGCGACATCGACGGGCTGGTGCCCACGCGGGATGAGCGCGGCC
AGCCCATCCCAGAGTGGAAGCGGCAGGTGATGGTGCGGAAGCTGCAGGCGCGCCTGGGCGCAGAGAGCTC
CGCAGAGGCCCAGGACAATGGTGGGAGCTCAGGCCCCACGGAGCAGGCGGCCTGGAGGTACTCACAGACT
CATCAGGCCATCCTGGGGCCCTTTGGGGAGCTGCTGACAGAGGATGACCTGGTCTACCTGGAGAAGCAGA
TTGCAGACCTGCAGCTTCGGCGCCGCTGTCAGGAGTATGAGAGTGAGCTGGGCCGGTTGGCGGCTGAGCT
GCAGGCCCTGCTGCCCGAGCCCCTGGTCAGCATCACGGTCAACAGCCACTTCCTGCCCCGGGCGCCCGGA
CTGGAGGTTGAGGAGGCCTCAATCCCAGCGGCTGAGCCCGCAGGGTCTGCGGAGGCCTCAGAGGTGGCCC
CCGGGGTGCAGCCCCTGCCCTTCTGGTGCAGCCACATCTCCCGCCTGGTACGCAGCCTGTCCCTGCTGCT
GAAGGGCGTGCATGGGCTAGTACAGGGGGATGAGAAGCCATCCACCCGGCCCCTGCAGGACACCTGCAGG
GAGGCCTCGGCCAGCCCCCCTCGGAGCGAGGCCCAGCGCCAGATCCAGGAGTGGGGGGTGTCTGTGCGGA
CGCTGCGGGGCAACTTCGAGTCGGCCTCTGGCCCACTCTGTGGCTTCAACCCTGGCCCCTGCGAGCCGGG
GGCCCAGCACAGGCAGTGCCTGAGTGGCTGCTGGCCAGCCCTGCCTAAGCCCCGCAGTGGCCTGGCTTCA
GGGGAGCCCAGGCCTGGCGACACAGAGGAGGCCAGCGACTCTGGCATCAGCTGCGAGGAGGTGCCATCAG
AGGCGGGTGCCGCAGCCGGCCCAGACCTGGCCAGCCTGCGCAAGGAGCGCATCATCATGCTCTTCCTCAG
CCACTGGAGGAGATCGGCCTACACGCCGGCCCTCAAGACAGTGGCCTGCAGGACCCTAGGAGCCCGCCAC
GCGGGGTTGCGGGGCCAGGAGGCCGCCAGGAGCCCTGGGCCACCCTCCCCGCCCAGCGAGGGCCCCCGGC
TGGGCCACCTGTGGCAGCAGCGCAGCACCATCACCCACCTGCTGGGCAACTGGAAGGCCATCATGGCTCA
CGTGCCCGCCCGGCAGCTGCGGCGGCTGAGCCGGCAGCCCCGCGGGGCTTTGTCCCCCGAGCAGTTCCTG
CCCCACGTGGACGGGGCTCCGGTGCCCTACAGCAGCCTCTCACTGGATCTCTTCATGCTGGGTTACTTCC
AGCTGCTGGAGTGCGACCTGCCGGCGGAGGAGCGGAAGCTGCGCCACCTGCTGTGCTTCGAGGTCTTCGA
GCACCTGGGCACCCACGGCTGGGAGGCTGTGCGCGCCTTCCACAAGGCCGTGACCGACGAGGTGGCCGCC
GGCCGCCGGGCCTGGACCGACGGCTTCGAGGACATCAAAGCCCGCTTCTTTGGCTCCAGCCAGCGTCCCG
CCTGGGATACGGAGCCTGGCCGCAAGTCAGGTCTGACCCTGCTCGGGCCCCTGCCTCACGCCGCCGTCCC
CTGCAGCGGCCCTGAGCCCACAGCACAGCGGCTGGGGTCCCGCTCCCAGCAGGGCAGCTTCAACGGTGAG
GACATCTGCGGCTACATCAACCGCAGCTTTGCCTTCTGGAAGGAGAAGGAAGCTGAGATGTTCAACTTTG
GAGAATGA

Translation (1005 aa):
MEKQRALVAAKDGDVATLERLLEAGALGPGITDALGAGLVHHATRAGHLDCVKFLVQRAQLPGNQRAHNG
ATPAHDAAATGSLAELCWLVREGGCGLQDQDASGVSPLHLAARFGHPVLVEWLLHEGHSATLETREGARP
LHHAAVSGDLTCLKLLTAAHGSSVNRRTRSGASPLYLACQEGHLHLAQFLVKDCGADVHLRALDGMSALH
AAAARGHYSLVVWLVTFTDIGLTARDNEGATALHFAARGGHTPILDRLLLMGTPILRDSWGGTPLHDAAE
NGQMECCQTLVSHHVDPSLRDEDGYTAADLAEYHGHRDCAQYLREVAQPVPLLMTPPPPPFPPPPLLATR
RSLEDGRRGGPGPGNPSPMSLSPAWPGHPDQPLPREQMTSPAPPRIITSATADPEGTETALAGDTSDGLA
ALQLDGLPSGDIDGLVPTRDERGQPIPEWKRQVMVRKLQARLGAESSAEAQDNGGSSGPTEQAAWRYSQT
HQAILGPFGELLTEDDLVYLEKQIADLQLRRRCQEYESELGRLAAELQALLPEPLVSITVNSHFLPRAPG
LEVEEASIPAAEPAGSAEASEVAPGVQPLPFWCSHISRLVRSLSLLLKGVHGLVQGDEKPSTRPLQDTCR
EASASPPRSEAQRQIQEWGVSVRTLRGNFESASGPLCGFNPGPCEPGAQHRQCLSGCWPALPKPRSGLAS
GEPRPGDTEEASDSGISCEEVPSEAGAAAGPDLASLRKERIIMLFLSHWRRSAYTPALKTVACRTLGARH
AGLRGQEAARSPGPPSPPSEGPRLGHLWQQRSTITHLLGNWKAIMAHVPARQLRRLSRQPRGALSPEQFL
PHVDGAPVPYSSLSLDLFMLGYFQLLECDLPAEERKLRHLLCFEVFEHLGTHGWEAVRAFHKAVTDEVAA
GRRAWTDGFEDIKARFFGSSQRPAWDTEPGRKSGLTLLGPLPHAAVPCSGPEPTAQRLGSRSQQGSFNGE
DICGYINRSFAFWKEKEAEMFNFGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH