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Report for CCDS14045.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14045.1 Public Homo sapiens 22 MCAT 24 110 108 CCDS HistoryNCBI Gene:27349Re-query CCDS DB by CCDS ID:14045.1Re-query CCDS DB by GeneID:27349See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14045.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327555.5 ENSP00000331306.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000327555.5Link to Ensembl Protein Viewer:ENSP00000331306.5Re-query CCDS DB by Nucleotide ID:ENST00000327555Re-query CCDS DB by Protein ID:ENSP00000331306
Original member Current member NCBI NM_014507.3 NP_055322.1 Accepted alive Link to Nucleotide Sequence:NM_014507.3Link to Protein Sequence:NP_055322.1Re-query CCDS DB by Nucleotide ID:NM_014507Re-query CCDS DB by Protein ID:NP_055322Link to BLAST:NP_055322.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055322.1 180 Q8IVS2-2 180 100% 0 0

Chromosomal Locations for CCDS 14045.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 43133455 43133486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43141162 43141249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43142926 43143348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (543 nt):
ATGAGCGTCCGGGTCGCACGGGTAGCGTGGGTCAGGGGCTTGGGCGCCAGCTACCGCCGCGGCGCCTCGA
GCTTCCCGGTGCCTCCGCCGGGCGCCCAGGGTGTAGCGGAGCTGCTGCGAGATGCGACCGGGGCGGAGGA
GGAGGCGCCCTGGGCGGCGACGGAGCGGCGAATGCCGGGCCAGTGCTCCGTGCTGCTCTTCCCGGGCCAG
GGCAGCCAGGTGGTGGGCATGGGCCGCGGTCTGCTCAACTACCCGCGCGTCCGCGAACTCTACGCCGCCG
CCCGCCGCGTGCTGGGCTACGACCTGCTGGAACTGAGCCTGCACGGGCCGCAGGAGACCCTGGACCGCAC
CGTGCACTGTCAGCCCGCGATCTTCGTGGCATCGCTGGCCGCTGTCGAGAAACTACATCACCTGCAGCCC
TCGGTGATTGAGAACTGTGTTGCTGCTGCTGGATTCAGTGTGGGAGAGTTTGCAGCCCTAGTGTTTGCCG
GAGCCATGGAATTTGCTGAAGGCTCTACGGTTTCTCCAGAAGAATTCCTCTAA

Translation (180 aa):
MSVRVARVAWVRGLGASYRRGASSFPVPPPGAQGVAELLRDATGAEEEAPWAATERRMPGQCSVLLFPGQ
GSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHCQPAIFVASLAAVEKLHHLQP
SVIENCVAAAGFSVGEFAALVFAGAMEFAEGSTVSPEEFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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