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Report for CCDS56428.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56428.1 Public Homo sapiens 6 NCR2 24 110 108 CCDS HistoryNCBI Gene:9436Re-query CCDS DB by CCDS ID:56428.1Re-query CCDS DB by GeneID:9436See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 56428.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373086.3 ENSP00000362178.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373086.3Link to Ensembl Protein Viewer:ENSP00000362178.3Re-query CCDS DB by Nucleotide ID:ENST00000373086Re-query CCDS DB by Protein ID:ENSP00000362178
Original member Current member NCBI NM_001199509.2 NP_001186438.1 Accepted alive Link to Nucleotide Sequence:NM_001199509.2Link to Protein Sequence:NP_001186438.1Re-query CCDS DB by Nucleotide ID:NM_001199509Re-query CCDS DB by Protein ID:NP_001186438Link to BLAST:NP_001186438.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186438.1 270 O95944-2 270 100% 0 0

Chromosomal Locations for CCDS 56428.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 41335877 41335928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41336087 41336428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41341794 41341929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41342000 41342149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41342918 41343024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41350678 41350703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (813 nt):
ATGGCCTGGCGAGCCCTACACCCACTGCTACTGCTGCTGCTGCTGTTCCCAGGCTCTCAGGCACAATCCA
AGGCTCAGGTACTTCAAAGTGTGGCAGGGCAGACGCTAACCGTGAGATGCCAGTACCCGCCCACGGGCAG
TCTCTACGAGAAGAAAGGCTGGTGTAAGGAGGCTTCAGCACTTGTGTGCATCAGGTTAGTCACCAGCTCC
AAGCCCAGGACGATGGCTTGGACCTCTCGATTCACAATCTGGGACGACCCTGATGCTGGCTTCTTCACTG
TCACCATGACTGATCTGAGAGAGGAAGACTCAGGACATTACTGGTGTAGAATCTACCGCCCTTCTGACAA
CTCTGTCTCTAAGTCCGTCAGATTCTATCTGGTGGTATCTCCAGCCTCTGCCTCCACACAGACCTCCTGG
ACTCCCCGCGACCTGGTCTCTTCACAGACCCAGACCCAGAGCTGTGTGCCTCCCACTGCAGGAGCCAGAC
AAGCCCCTGAGTCTCCATCTACCATCCCTGTCCCTTCACACCCGTCCTCTCCCCTTCCTGTCCCTCTGCC
TTCCAGGCCACAGAACTCCACGCTCCGCCCTGGCCCTGCAGCCCCCATTGCCCTGGTGCCTGTGTTCTGT
GGACTCCTCGTAGCCAAGAGCCTGGTGCTGTCAGCCCTGCTCGTCTGGTGGGTTTTAAGGAATCGGCACA
TGCAGCATCAAGGGAGGTCTCTGCTGCACCCAGCTCAGCCCAGGCCCCAGGCCCATAGACACTTCCCACT
GAGCCACAGGGCACCAGGGGGGACATATGGTGGAAAACCATGA

Translation (270 aa):
MAWRALHPLLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSS
KPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRFYLVVSPASASTQTSW
TPRDLVSSQTQTQSCVPPTAGARQAPESPSTIPVPSHPSSPLPVPLPSRPQNSTLRPGPAAPIALVPVFC
GLLVAKSLVLSALLVWWVLRNRHMQHQGRSLLHPAQPRPQAHRHFPLSHRAPGGTYGGKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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