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Report for CCDS47835.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47835.1 Public Homo sapiens 8 MBOAT4 24 110 108 CCDS HistoryNCBI Gene:619373Re-query CCDS DB by CCDS ID:47835.1Re-query CCDS DB by GeneID:619373See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47835.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320542.4 ENSP00000314196.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000320542.4Link to Ensembl Protein Viewer:ENSP00000314196.3Re-query CCDS DB by Nucleotide ID:ENST00000320542Re-query CCDS DB by Protein ID:ENSP00000314196
Original member Current member NCBI NM_001100916.2 NP_001094386.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001100916.2Link to Protein Sequence:NP_001094386.1Re-query CCDS DB by Nucleotide ID:NM_001100916Re-query CCDS DB by Protein ID:NP_001094386Link to BLAST:NP_001094386.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001094386.1 435 Q96T53-1 435 100% 0 0

Chromosomal Locations for CCDS 47835.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 30131943 30132906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30138532 30138756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30144483 30144601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1308 nt):
ATGGAGTGGCTTTGGCTGTTCTTTCTCCATCCTATATCGTTTTACCAGGGGGCTGCATTTCCCTTTGCAC
TTCTCTTCAATTATCTCTGCATCATGGATTCATTCTCCACTCGTGCCAGGTACCTCTTTCTCCTGACTGG
AGGAGGTGCCCTGGCCGTGGCTGCCATGGGTTCCTACGCCGTGCTCGTCTTCACCCCTGCTGTCTGCGCT
GTGGCTCTCCTCTGTTCCCTGGCTCCTCAGCAAGTCCACAGGTGGACCTTCTGCTTTCAGATGAGCTGGC
AGACCTTGTGTCACCTAGGTCTGCACTACACTGAGTATTATCTGCATGAGCCTCCTTCTGTGAGGTTCTG
CATCACTCTTTCTTCTCTCATGCTCTTGACCCAGAGGGTCACGTCCCTCTCTCTGGACATTTGTGAGGGG
AAAGTGAAGGCAGCATCTGGAGGCTTCAGGAGCAGGAGCTCTTTGTCTGAGCATGTGTGTAAGGCACTGC
CCTATTTCAGCTACTTGCTCTTTTTCCCTGCTCTCCTGGGAGGCTCTCTGTGCTCCTTCCAGCGATTTCA
GGCTCGTGTTCAAGGGTCCAGTGCTTTGCATCCCAGACACTCTTTCTGGGCTCTGAGCTGGAGGGGTCTG
CAGATTCTTGGACTAGAATGCCTAAACGTGGCAGTGAGCAGGGTGGTGGATGCAGGAGCGGGACTGACTG
ATTGCCAGCAATTCGAGTGCATCTATGTCGTGTGGACCACAGCTGGGCTTTTCAAGCTCACCTACTACTC
CCACTGGATCCTGGACGACTCCCTCCTCCACGCAGCGGGCTTTGGGCCTGAGCTTGGTCAGAGCCCTGGA
GAGGAGGGATATGTCCCCGATGCAGACATCTGGACCCTGGAAAGAACCCACAGGATATCTGTGTTCTCAA
GAAAGTGGAACCAAAGCACAGCTCGATGGCTCCGACGGCTTGTATTCCAGCACAGCAGGGCTTGGCCGTT
GTTGCAGACATTTGCCTTCTCTGCCTGGTGGCATGGACTCCATCCAGGACAGGTGTTTGGTTTCGTTTGC
TGGGCCGTGATGGTGGAAGCTGACTACCTGATTCACTCCTTTGCCAATGAGTTTATCAGATCCTGGCCGA
TGAGGCTGTTCTATAGAACCCTCACCTGGGCCCACACCCAGTTGATCATTGCCTACATCATGCTGGCTGT
GGAGGTCAGGAGTCTCTCCTCTCTCTGGTTGCTCTGTAATTCGTACAACAGTGTCTTTCCCATGGTGTAC
TGTATTCTGCTTTTGCTATTGGCGAAGAGAAAGCACAAATGTAACTGA

Translation (435 aa):
MEWLWLFFLHPISFYQGAAFPFALLFNYLCIMDSFSTRARYLFLLTGGGALAVAAMGSYAVLVFTPAVCA
VALLCSLAPQQVHRWTFCFQMSWQTLCHLGLHYTEYYLHEPPSVRFCITLSSLMLLTQRVTSLSLDICEG
KVKAASGGFRSRSSLSEHVCKALPYFSYLLFFPALLGGSLCSFQRFQARVQGSSALHPRHSFWALSWRGL
QILGLECLNVAVSRVVDAGAGLTDCQQFECIYVVWTTAGLFKLTYYSHWILDDSLLHAAGFGPELGQSPG
EEGYVPDADIWTLERTHRISVFSRKWNQSTARWLRRLVFQHSRAWPLLQTFAFSAWWHGLHPGQVFGFVC
WAVMVEADYLIHSFANEFIRSWPMRLFYRTLTWAHTQLIIAYIMLAVEVRSLSSLWLLCNSYNSVFPMVY
CILLLLLAKRKHKCN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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